Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1785
Experiment: MoYLS4 with Carbenicillin 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Carbenicillin 0.0625 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,184,330 | - | DvMF_1784 | 0.50 | -1.0 | |
2,184,359 | + | DvMF_1784 | 0.53 | -0.6 | |
2,184,359 | + | DvMF_1784 | 0.53 | -1.0 | |
2,184,364 | + | DvMF_1784 | 0.53 | -0.1 | |
2,184,367 | - | DvMF_1784 | 0.54 | -0.8 | |
2,184,385 | + | DvMF_1784 | 0.55 | -0.9 | |
2,184,463 | - | DvMF_1784 | 0.62 | -0.6 | |
2,184,573 | + | DvMF_1784 | 0.72 | -0.6 | |
2,184,667 | + | DvMF_1784 | 0.81 | -0.7 | |
2,184,681 | - | DvMF_1784 | 0.82 | -0.9 | |
2,184,710 | + | DvMF_1784 | 0.85 | -0.8 | |
2,184,720 | + | DvMF_1784 | 0.86 | +0.0 | |
2,184,781 | + | +0.1 | |||
2,184,781 | + | -0.6 | |||
2,184,781 | + | -0.5 | |||
2,184,836 | - | -0.3 | |||
2,184,998 | + | -0.4 | |||
2,185,342 | - | DvMF_1785 | 0.18 | -1.0 | |
2,185,356 | + | DvMF_1785 | 0.23 | -0.8 | |
2,185,364 | - | DvMF_1785 | 0.26 | -0.1 | |
2,186,052 | - | DvMF_1786 | 0.30 | -0.4 | |
2,186,388 | + | DvMF_1786 | 0.63 | +0.7 | |
2,186,485 | + | DvMF_1786 | 0.73 | -0.5 | |
2,186,485 | + | DvMF_1786 | 0.73 | -0.3 | |
2,186,485 | + | DvMF_1786 | 0.73 | +1.2 |
Or see this region's nucleotide sequence