Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1701
Experiment: MoYLS4 with Carbenicillin 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Carbenicillin 0.0625 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,074,390 | + | DvMF_1700 | 0.63 | +0.2 | |
2,074,554 | - | DvMF_1700 | 0.72 | -0.2 | |
2,074,636 | + | DvMF_1700 | 0.77 | -0.3 | |
2,074,882 | + | -0.6 | |||
2,074,963 | + | -0.3 | |||
2,075,134 | - | +0.2 | |||
2,075,234 | - | -0.4 | |||
2,075,336 | - | -1.1 | |||
2,075,494 | - | -1.1 | |||
2,075,540 | + | DvMF_1701 | 0.13 | -1.0 | |
2,075,544 | - | DvMF_1701 | 0.13 | -0.5 | |
2,075,548 | - | DvMF_1701 | 0.13 | -1.2 | |
2,075,959 | - | DvMF_1701 | 0.43 | -0.6 | |
2,076,047 | - | DvMF_1701 | 0.49 | -0.6 | |
2,076,060 | + | DvMF_1701 | 0.50 | -1.0 | |
2,076,219 | + | DvMF_1701 | 0.62 | -1.1 | |
2,076,264 | + | DvMF_1701 | 0.65 | +1.0 | |
2,076,300 | + | DvMF_1701 | 0.68 | -1.3 | |
2,076,663 | - | -0.9 | |||
2,076,701 | + | -0.6 |
Or see this region's nucleotide sequence