Experiment: MoYLS4 with Carbenicillin 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1695 and DvMF_1696 are separated by 432 nucleotides DvMF_1696 and DvMF_1697 are separated by 463 nucleotides
DvMF_1695: DvMF_1695 - cytochrome B561 (RefSeq), at 2,065,825 to 2,066,454
_1695
DvMF_1696: DvMF_1696 - Phosphoglycerate mutase (RefSeq), at 2,066,887 to 2,068,095
_1696
DvMF_1697: DvMF_1697 - hypothetical protein (RefSeq), at 2,068,559 to 2,068,888
_1697
Position (kb)
2066
2067
2068
2069 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2065.936 kb on + strand, within DvMF_1695 at 2066.005 kb on + strand, within DvMF_1695 at 2066.077 kb on - strand, within DvMF_1695 at 2066.132 kb on - strand, within DvMF_1695 at 2066.132 kb on - strand, within DvMF_1695 at 2066.287 kb on - strand, within DvMF_1695 at 2066.374 kb on - strand, within DvMF_1695 at 2066.376 kb on + strand, within DvMF_1695 at 2066.459 kb on - strand at 2066.570 kb on - strand at 2066.835 kb on - strand at 2066.879 kb on + strand at 2067.119 kb on - strand, within DvMF_1696 at 2067.119 kb on - strand, within DvMF_1696 at 2067.124 kb on - strand, within DvMF_1696 at 2067.239 kb on - strand, within DvMF_1696 at 2067.380 kb on + strand, within DvMF_1696 at 2067.380 kb on + strand, within DvMF_1696 at 2067.473 kb on - strand, within DvMF_1696 at 2067.480 kb on + strand, within DvMF_1696 at 2067.611 kb on - strand, within DvMF_1696 at 2067.856 kb on - strand, within DvMF_1696 at 2067.980 kb on + strand at 2068.049 kb on - strand at 2068.154 kb on + strand at 2068.219 kb on + strand at 2068.220 kb on + strand at 2068.220 kb on + strand at 2068.238 kb on - strand at 2068.240 kb on + strand at 2068.240 kb on + strand at 2068.248 kb on - strand at 2068.412 kb on - strand at 2068.492 kb on + strand at 2068.674 kb on + strand, within DvMF_1697 at 2068.674 kb on + strand, within DvMF_1697 at 2068.801 kb on - strand, within DvMF_1697 at 2068.834 kb on + strand, within DvMF_1697 at 2068.849 kb on - strand, within DvMF_1697 at 2069.092 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Carbenicillin 0.0625 mg/ml remove 2,065,936 + DvMF_1695 0.18 +0.2 2,066,005 + DvMF_1695 0.29 -0.6 2,066,077 - DvMF_1695 0.40 -0.7 2,066,132 - DvMF_1695 0.49 -1.3 2,066,132 - DvMF_1695 0.49 -0.8 2,066,287 - DvMF_1695 0.73 -0.6 2,066,374 - DvMF_1695 0.87 -0.4 2,066,376 + DvMF_1695 0.87 -1.2 2,066,459 - -0.5 2,066,570 - +0.2 2,066,835 - -0.1 2,066,879 + -0.3 2,067,119 - DvMF_1696 0.19 -0.4 2,067,119 - DvMF_1696 0.19 -0.7 2,067,124 - DvMF_1696 0.20 -2.1 2,067,239 - DvMF_1696 0.29 -0.3 2,067,380 + DvMF_1696 0.41 -0.7 2,067,380 + DvMF_1696 0.41 -0.6 2,067,473 - DvMF_1696 0.48 -0.1 2,067,480 + DvMF_1696 0.49 -0.1 2,067,611 - DvMF_1696 0.60 -0.1 2,067,856 - DvMF_1696 0.80 -0.3 2,067,980 + -0.4 2,068,049 - -0.0 2,068,154 + -0.6 2,068,219 + -0.5 2,068,220 + +0.4 2,068,220 + -0.5 2,068,238 - -0.4 2,068,240 + -0.5 2,068,240 + -0.6 2,068,248 - +0.0 2,068,412 - -0.5 2,068,492 + -0.3 2,068,674 + DvMF_1697 0.35 +2.6 2,068,674 + DvMF_1697 0.35 -0.5 2,068,801 - DvMF_1697 0.73 -0.1 2,068,834 + DvMF_1697 0.83 -0.2 2,068,849 - DvMF_1697 0.88 -0.8 2,069,092 + -0.1
Or see this region's nucleotide sequence