Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1631
Experiment: MoYLS4 with Carbenicillin 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Carbenicillin 0.0625 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,009,863 | - | DvMF_1630 | 0.44 | -0.2 | |
2,009,865 | + | DvMF_1630 | 0.44 | -0.1 | |
2,009,921 | + | DvMF_1630 | 0.49 | +0.1 | |
2,010,724 | + | -0.5 | |||
2,010,864 | + | -0.0 | |||
2,010,872 | - | -0.3 | |||
2,010,872 | - | -0.7 | |||
2,010,874 | + | -0.0 | |||
2,010,921 | - | -0.3 | |||
2,011,028 | - | DvMF_1631 | 0.21 | -0.7 | |
2,011,028 | - | DvMF_1631 | 0.21 | -0.4 | |
2,011,044 | + | DvMF_1631 | 0.23 | -0.3 | |
2,011,208 | + | DvMF_1631 | 0.42 | -1.1 | |
2,011,216 | - | DvMF_1631 | 0.43 | -1.5 | |
2,011,433 | + | DvMF_1631 | 0.70 | -0.3 | |
2,011,473 | - | DvMF_1631 | 0.74 | -2.9 | |
2,011,783 | - | +0.1 | |||
2,011,835 | - | -0.3 | |||
2,011,987 | - | DvMF_1632 | 0.19 | -0.4 | |
2,012,061 | + | DvMF_1632 | 0.24 | -0.3 | |
2,012,102 | + | DvMF_1632 | 0.26 | -0.9 | |
2,012,219 | + | DvMF_1632 | 0.33 | -0.8 | |
2,012,328 | - | DvMF_1632 | 0.40 | +0.5 | |
2,012,335 | - | DvMF_1632 | 0.41 | -0.4 | |
2,012,657 | + | DvMF_1632 | 0.61 | -0.6 |
Or see this region's nucleotide sequence