Experiment: MoYLS4 with Carbenicillin 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0701 and DvMF_0702 are separated by 245 nucleotides DvMF_0702 and DvMF_0703 are separated by 32 nucleotides DvMF_0703 and DvMF_0704 are separated by 2 nucleotides DvMF_0704 and DvMF_0705 are separated by 205 nucleotides
DvMF_0701: DvMF_0701 - integral membrane sensor signal transduction histidine kinase (RefSeq), at 849,817 to 851,454
_0701
DvMF_0702: DvMF_0702 - hypothetical protein (RefSeq), at 851,700 to 852,092
_0702
DvMF_0703: DvMF_0703 - protein of unknown function DUF81 (RefSeq), at 852,125 to 853,063
_0703
DvMF_0704: DvMF_0704 - hypothetical protein (RefSeq), at 853,066 to 853,830
_0704
DvMF_0705: DvMF_0705 - Pyruvate, water dikinase (RefSeq), at 854,036 to 856,669
_0705
Position (kb) 852
853
854 Strain fitness (log2 ratio) -1
0
1 at 851.694 kb on - strand at 851.962 kb on + strand, within DvMF_0702 at 852.006 kb on + strand, within DvMF_0702 at 852.142 kb on - strand at 852.193 kb on - strand at 852.214 kb on + strand at 852.341 kb on - strand, within DvMF_0703 at 852.686 kb on - strand, within DvMF_0703 at 852.757 kb on + strand, within DvMF_0703 at 852.795 kb on + strand, within DvMF_0703 at 852.795 kb on + strand, within DvMF_0703 at 852.813 kb on - strand, within DvMF_0703 at 852.839 kb on + strand, within DvMF_0703 at 853.142 kb on - strand at 853.302 kb on + strand, within DvMF_0704 at 853.340 kb on - strand, within DvMF_0704 at 853.348 kb on - strand, within DvMF_0704 at 853.348 kb on - strand, within DvMF_0704 at 853.348 kb on - strand, within DvMF_0704
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Carbenicillin 0.0625 mg/ml remove 851,694 - -0.0 851,962 + DvMF_0702 0.67 +1.1 852,006 + DvMF_0702 0.78 +1.1 852,142 - -0.7 852,193 - -0.4 852,214 + -0.8 852,341 - DvMF_0703 0.23 -0.7 852,686 - DvMF_0703 0.60 +0.0 852,757 + DvMF_0703 0.67 +0.1 852,795 + DvMF_0703 0.71 +0.3 852,795 + DvMF_0703 0.71 -0.6 852,813 - DvMF_0703 0.73 -0.4 852,839 + DvMF_0703 0.76 -0.8 853,142 - +1.0 853,302 + DvMF_0704 0.31 -0.5 853,340 - DvMF_0704 0.36 -1.1 853,348 - DvMF_0704 0.37 -0.3 853,348 - DvMF_0704 0.37 +0.2 853,348 - DvMF_0704 0.37 -0.9
Or see this region's nucleotide sequence