Experiment: MoYLS4 with Carbenicillin 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0507 and DvMF_0508 overlap by 4 nucleotides DvMF_0508 and DvMF_0509 are separated by 350 nucleotides
DvMF_0507: DvMF_0507 - glycosyl transferase group 1 (RefSeq), at 595,724 to 596,998
_0507
DvMF_0508: DvMF_0508 - glycosyl transferase group 1 (RefSeq), at 596,995 to 598,908
_0508
DvMF_0509: DvMF_0509 - diguanylate cyclase (RefSeq), at 599,259 to 600,755
_0509
Position (kb) 596
597
598
599 Strain fitness (log2 ratio) -1
0
1 at 596.177 kb on - strand, within DvMF_0507 at 596.184 kb on + strand, within DvMF_0507 at 596.198 kb on - strand, within DvMF_0507 at 596.316 kb on - strand, within DvMF_0507 at 596.526 kb on - strand, within DvMF_0507 at 596.536 kb on + strand, within DvMF_0507 at 596.726 kb on - strand, within DvMF_0507 at 596.798 kb on + strand, within DvMF_0507 at 596.892 kb on - strand at 597.002 kb on - strand at 597.282 kb on - strand, within DvMF_0508 at 597.410 kb on + strand, within DvMF_0508 at 597.429 kb on + strand, within DvMF_0508 at 597.569 kb on + strand, within DvMF_0508 at 597.592 kb on + strand, within DvMF_0508 at 597.685 kb on + strand, within DvMF_0508 at 597.907 kb on - strand, within DvMF_0508 at 597.917 kb on - strand, within DvMF_0508 at 597.917 kb on - strand, within DvMF_0508 at 598.013 kb on - strand, within DvMF_0508 at 598.072 kb on - strand, within DvMF_0508 at 598.190 kb on - strand, within DvMF_0508 at 598.204 kb on - strand, within DvMF_0508 at 598.267 kb on - strand, within DvMF_0508 at 598.267 kb on - strand, within DvMF_0508 at 598.358 kb on + strand, within DvMF_0508 at 598.358 kb on + strand, within DvMF_0508 at 598.358 kb on + strand, within DvMF_0508 at 598.421 kb on - strand, within DvMF_0508 at 598.484 kb on + strand, within DvMF_0508 at 598.570 kb on - strand, within DvMF_0508 at 598.628 kb on + strand, within DvMF_0508 at 598.770 kb on - strand at 598.787 kb on - strand at 598.792 kb on - strand at 599.081 kb on - strand at 599.096 kb on - strand at 599.121 kb on - strand at 599.259 kb on + strand at 599.351 kb on - strand at 599.760 kb on - strand, within DvMF_0509
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Carbenicillin 0.0625 mg/ml remove 596,177 - DvMF_0507 0.36 -0.7 596,184 + DvMF_0507 0.36 -0.2 596,198 - DvMF_0507 0.37 -0.3 596,316 - DvMF_0507 0.46 -0.8 596,526 - DvMF_0507 0.63 -0.4 596,536 + DvMF_0507 0.64 -0.1 596,726 - DvMF_0507 0.79 +0.6 596,798 + DvMF_0507 0.84 -0.4 596,892 - -1.3 597,002 - -0.7 597,282 - DvMF_0508 0.15 -0.7 597,410 + DvMF_0508 0.22 -0.3 597,429 + DvMF_0508 0.23 -0.3 597,569 + DvMF_0508 0.30 -0.2 597,592 + DvMF_0508 0.31 -0.4 597,685 + DvMF_0508 0.36 -0.3 597,907 - DvMF_0508 0.48 -0.2 597,917 - DvMF_0508 0.48 +0.2 597,917 - DvMF_0508 0.48 -0.9 598,013 - DvMF_0508 0.53 -0.3 598,072 - DvMF_0508 0.56 +1.1 598,190 - DvMF_0508 0.62 -0.4 598,204 - DvMF_0508 0.63 -0.0 598,267 - DvMF_0508 0.66 -0.2 598,267 - DvMF_0508 0.66 -0.8 598,358 + DvMF_0508 0.71 -0.2 598,358 + DvMF_0508 0.71 -0.3 598,358 + DvMF_0508 0.71 -0.5 598,421 - DvMF_0508 0.75 -0.3 598,484 + DvMF_0508 0.78 -0.1 598,570 - DvMF_0508 0.82 -0.4 598,628 + DvMF_0508 0.85 -0.7 598,770 - -1.2 598,787 - -0.3 598,792 - -0.4 599,081 - +1.2 599,096 - -0.6 599,121 - -0.6 599,259 + -0.7 599,351 - -0.6 599,760 - DvMF_0509 0.33 +0.7
Or see this region's nucleotide sequence