Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0116
Experiment: MoYLS4 with Carbenicillin 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Carbenicillin 0.0625 mg/ml |
---|---|---|---|---|---|
remove | |||||
126,089 | - | DvMF_0115 | 0.48 | -0.1 | |
126,463 | - | DvMF_0115 | 0.88 | -0.3 | |
126,481 | + | DvMF_0115 | 0.90 | -0.7 | |
126,514 | + | +0.3 | |||
126,999 | + | -0.3 | |||
127,234 | - | DvMF_0116 | 0.59 | -2.2 | |
127,252 | - | DvMF_0116 | 0.63 | -1.8 | |
127,287 | - | DvMF_0116 | 0.71 | -1.8 | |
127,311 | + | DvMF_0116 | 0.77 | -1.0 | |
127,314 | - | DvMF_0116 | 0.78 | -1.6 | |
127,457 | + | -0.3 | |||
127,488 | - | +0.3 | |||
127,597 | + | -0.2 | |||
127,719 | - | +0.3 | |||
127,719 | - | -0.1 | |||
127,778 | + | DvMF_0117 | 0.15 | -0.6 | |
128,111 | + | DvMF_0117 | 0.55 | -0.6 | |
128,303 | - | DvMF_0117 | 0.78 | +1.3 | |
128,310 | + | DvMF_0117 | 0.79 | +0.2 | |
128,390 | + | DvMF_0117 | 0.89 | -2.5 |
Or see this region's nucleotide sequence