Experiment: m.b. Chlorate 40 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3568 and Dshi_3569 overlap by 29 nucleotides Dshi_3569 and Dshi_3570 are separated by 35 nucleotides Dshi_3570 and Dshi_3571 are separated by 75 nucleotides
Dshi_3568: Dshi_3568 - OmpA domain protein (RefSeq), at 3,757,069 to 3,758,595
_3568
Dshi_3569: Dshi_3569 - DNA repair protein RadC (RefSeq), at 3,758,567 to 3,759,331
_3569
Dshi_3570: Dshi_3570 - chaperone protein DnaJ (RefSeq), at 3,759,367 to 3,760,518
_3570
Dshi_3571: Dshi_3571 - chaperone protein DnaK (RefSeq), at 3,760,594 to 3,762,513
_3571
Position (kb)
3759
3760
3761 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3758.525 kb on - strand at 3758.679 kb on + strand, within Dshi_3569 at 3758.737 kb on + strand, within Dshi_3569 at 3758.745 kb on - strand, within Dshi_3569 at 3758.816 kb on - strand, within Dshi_3569 at 3758.870 kb on - strand, within Dshi_3569 at 3758.952 kb on + strand, within Dshi_3569 at 3758.991 kb on + strand, within Dshi_3569 at 3759.020 kb on - strand, within Dshi_3569 at 3759.185 kb on + strand, within Dshi_3569 at 3759.218 kb on - strand, within Dshi_3569 at 3759.328 kb on + strand at 3759.365 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorate 40 mM remove 3,758,525 - +0.7 3,758,679 + Dshi_3569 0.15 +1.7 3,758,737 + Dshi_3569 0.22 -3.6 3,758,745 - Dshi_3569 0.23 +0.5 3,758,816 - Dshi_3569 0.33 +0.4 3,758,870 - Dshi_3569 0.40 -0.3 3,758,952 + Dshi_3569 0.50 -2.5 3,758,991 + Dshi_3569 0.55 +0.2 3,759,020 - Dshi_3569 0.59 -2.9 3,759,185 + Dshi_3569 0.81 -3.6 3,759,218 - Dshi_3569 0.85 +0.7 3,759,328 + +0.7 3,759,365 + -0.1
Or see this region's nucleotide sequence