Experiment: m.b. Chlorate 40 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3480 and Dshi_3481 overlap by 8 nucleotides Dshi_3481 and Dshi_3482 overlap by 8 nucleotides Dshi_3482 and Dshi_3483 overlap by 4 nucleotides
Dshi_3480: Dshi_3480 - putative transcriptional regulator, ModE family (RefSeq), at 3,662,578 to 3,662,931
_3480
Dshi_3481: Dshi_3481 - molybdenum ABC transporter, periplasmic molybdate-binding protein (RefSeq), at 3,662,924 to 3,663,676
_3481
Dshi_3482: Dshi_3482 - molybdate ABC transporter, inner membrane subunit (RefSeq), at 3,663,669 to 3,664,367
_3482
Dshi_3483: Dshi_3483 - molybdate ABC transporter, ATPase subunit (RefSeq), at 3,664,364 to 3,665,446
_3483
Position (kb)
3663
3664
3665 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 3662.671 kb on + strand, within Dshi_3480 at 3662.713 kb on + strand, within Dshi_3480 at 3662.724 kb on + strand, within Dshi_3480 at 3662.788 kb on + strand, within Dshi_3480 at 3662.793 kb on + strand, within Dshi_3480 at 3662.907 kb on + strand at 3662.907 kb on + strand at 3662.907 kb on + strand at 3662.932 kb on + strand at 3662.957 kb on + strand at 3662.962 kb on + strand at 3662.982 kb on - strand at 3663.024 kb on - strand, within Dshi_3481 at 3663.077 kb on + strand, within Dshi_3481 at 3663.119 kb on + strand, within Dshi_3481 at 3663.142 kb on + strand, within Dshi_3481 at 3663.290 kb on - strand, within Dshi_3481 at 3663.292 kb on + strand, within Dshi_3481 at 3663.339 kb on - strand, within Dshi_3481 at 3663.386 kb on + strand, within Dshi_3481 at 3663.386 kb on + strand, within Dshi_3481 at 3663.416 kb on - strand, within Dshi_3481 at 3663.467 kb on + strand, within Dshi_3481 at 3663.589 kb on + strand, within Dshi_3481 at 3663.692 kb on + strand at 3663.692 kb on + strand at 3663.700 kb on - strand at 3663.703 kb on + strand at 3663.708 kb on + strand at 3663.708 kb on + strand at 3663.715 kb on - strand at 3663.716 kb on - strand at 3663.731 kb on - strand at 3663.748 kb on + strand, within Dshi_3482 at 3663.756 kb on - strand, within Dshi_3482 at 3663.828 kb on - strand, within Dshi_3482 at 3663.880 kb on + strand, within Dshi_3482 at 3663.955 kb on + strand, within Dshi_3482 at 3663.963 kb on - strand, within Dshi_3482 at 3663.974 kb on + strand, within Dshi_3482 at 3663.982 kb on - strand, within Dshi_3482 at 3664.036 kb on + strand, within Dshi_3482 at 3664.040 kb on + strand, within Dshi_3482 at 3664.044 kb on - strand, within Dshi_3482 at 3664.051 kb on + strand, within Dshi_3482 at 3664.051 kb on + strand, within Dshi_3482 at 3664.082 kb on - strand, within Dshi_3482 at 3664.140 kb on + strand, within Dshi_3482 at 3664.205 kb on + strand, within Dshi_3482 at 3664.205 kb on + strand, within Dshi_3482 at 3664.205 kb on + strand, within Dshi_3482 at 3664.213 kb on - strand, within Dshi_3482 at 3664.251 kb on + strand, within Dshi_3482 at 3664.321 kb on - strand at 3664.394 kb on + strand at 3664.419 kb on + strand at 3664.419 kb on - strand at 3664.504 kb on + strand, within Dshi_3483 at 3664.648 kb on + strand, within Dshi_3483 at 3664.689 kb on + strand, within Dshi_3483 at 3664.689 kb on + strand, within Dshi_3483 at 3664.802 kb on + strand, within Dshi_3483 at 3664.815 kb on - strand, within Dshi_3483 at 3664.892 kb on - strand, within Dshi_3483 at 3664.913 kb on - strand, within Dshi_3483 at 3664.926 kb on + strand, within Dshi_3483 at 3664.962 kb on + strand, within Dshi_3483 at 3665.021 kb on + strand, within Dshi_3483 at 3665.021 kb on + strand, within Dshi_3483 at 3665.029 kb on - strand, within Dshi_3483 at 3665.029 kb on - strand, within Dshi_3483 at 3665.077 kb on + strand, within Dshi_3483 at 3665.120 kb on + strand, within Dshi_3483 at 3665.232 kb on + strand, within Dshi_3483 at 3665.320 kb on + strand, within Dshi_3483 at 3665.338 kb on + strand at 3665.344 kb on - strand at 3665.359 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorate 40 mM remove 3,662,671 + Dshi_3480 0.26 -1.9 3,662,713 + Dshi_3480 0.38 +3.3 3,662,724 + Dshi_3480 0.41 -2.0 3,662,788 + Dshi_3480 0.59 +1.0 3,662,793 + Dshi_3480 0.61 -1.0 3,662,907 + -0.5 3,662,907 + -0.1 3,662,907 + -3.4 3,662,932 + -0.6 3,662,957 + +0.7 3,662,962 + -0.4 3,662,982 - +0.2 3,663,024 - Dshi_3481 0.13 -0.8 3,663,077 + Dshi_3481 0.20 -3.0 3,663,119 + Dshi_3481 0.26 -0.3 3,663,142 + Dshi_3481 0.29 +0.4 3,663,290 - Dshi_3481 0.49 +0.7 3,663,292 + Dshi_3481 0.49 +1.7 3,663,339 - Dshi_3481 0.55 -1.9 3,663,386 + Dshi_3481 0.61 -0.8 3,663,386 + Dshi_3481 0.61 -1.9 3,663,416 - Dshi_3481 0.65 -3.0 3,663,467 + Dshi_3481 0.72 -1.1 3,663,589 + Dshi_3481 0.88 +1.2 3,663,692 + -0.9 3,663,692 + -2.9 3,663,700 - -3.7 3,663,703 + -1.6 3,663,708 + -0.1 3,663,708 + +0.3 3,663,715 - +0.7 3,663,716 - -0.3 3,663,731 - +0.7 3,663,748 + Dshi_3482 0.11 -3.4 3,663,756 - Dshi_3482 0.12 -1.6 3,663,828 - Dshi_3482 0.23 -1.6 3,663,880 + Dshi_3482 0.30 -1.9 3,663,955 + Dshi_3482 0.41 -2.4 3,663,963 - Dshi_3482 0.42 -1.2 3,663,974 + Dshi_3482 0.44 +0.7 3,663,982 - Dshi_3482 0.45 -0.5 3,664,036 + Dshi_3482 0.53 -1.7 3,664,040 + Dshi_3482 0.53 -2.4 3,664,044 - Dshi_3482 0.54 -1.1 3,664,051 + Dshi_3482 0.55 -0.5 3,664,051 + Dshi_3482 0.55 -1.7 3,664,082 - Dshi_3482 0.59 -2.9 3,664,140 + Dshi_3482 0.67 -1.4 3,664,205 + Dshi_3482 0.77 -1.5 3,664,205 + Dshi_3482 0.77 +0.7 3,664,205 + Dshi_3482 0.77 -1.3 3,664,213 - Dshi_3482 0.78 -1.6 3,664,251 + Dshi_3482 0.83 +0.1 3,664,321 - +0.7 3,664,394 + -1.6 3,664,419 + -1.9 3,664,419 - -4.6 3,664,504 + Dshi_3483 0.13 -2.1 3,664,648 + Dshi_3483 0.26 +2.2 3,664,689 + Dshi_3483 0.30 -4.4 3,664,689 + Dshi_3483 0.30 -0.7 3,664,802 + Dshi_3483 0.40 +0.8 3,664,815 - Dshi_3483 0.42 +0.3 3,664,892 - Dshi_3483 0.49 +0.6 3,664,913 - Dshi_3483 0.51 +0.7 3,664,926 + Dshi_3483 0.52 -1.0 3,664,962 + Dshi_3483 0.55 -0.5 3,665,021 + Dshi_3483 0.61 -1.3 3,665,021 + Dshi_3483 0.61 -1.2 3,665,029 - Dshi_3483 0.61 -0.2 3,665,029 - Dshi_3483 0.61 -1.1 3,665,077 + Dshi_3483 0.66 -1.9 3,665,120 + Dshi_3483 0.70 +1.4 3,665,232 + Dshi_3483 0.80 +0.4 3,665,320 + Dshi_3483 0.88 -1.6 3,665,338 + -3.8 3,665,344 - -0.3 3,665,359 - -0.5
Or see this region's nucleotide sequence