Experiment: m.b. Chlorate 40 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2623 and Dshi_2624 are separated by 136 nucleotides Dshi_2624 and Dshi_2625 are separated by 9 nucleotides Dshi_2625 and Dshi_2626 are separated by 103 nucleotides Dshi_2626 and Dshi_2627 are separated by 1 nucleotides Dshi_2627 and Dshi_2628 overlap by 4 nucleotides
Dshi_2623: Dshi_2623 - peptidase M48 Ste24p (RefSeq), at 2,782,469 to 2,783,221
_2623
Dshi_2624: Dshi_2624 - hypothetical protein (RefSeq), at 2,783,358 to 2,783,780
_2624
Dshi_2625: Dshi_2625 - hypothetical protein (RefSeq), at 2,783,790 to 2,784,044
_2625
Dshi_2626: Dshi_2626 - major facilitator superfamily MFS_1 (RefSeq), at 2,784,148 to 2,785,326
_2626
Dshi_2627: Dshi_2627 - nitroreductase (RefSeq), at 2,785,328 to 2,785,978
_2627
Dshi_2628: Dshi_2628 - hypothetical protein (RefSeq), at 2,785,975 to 2,786,685
_2628
Position (kb)
2784
2785
2786 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 2783.349 kb on - strand at 2783.377 kb on - strand at 2783.523 kb on + strand, within Dshi_2624 at 2783.526 kb on - strand, within Dshi_2624 at 2783.526 kb on - strand, within Dshi_2624 at 2783.531 kb on - strand, within Dshi_2624 at 2783.531 kb on - strand, within Dshi_2624 at 2783.536 kb on - strand, within Dshi_2624 at 2783.582 kb on - strand, within Dshi_2624 at 2783.687 kb on - strand, within Dshi_2624 at 2783.694 kb on - strand, within Dshi_2624 at 2783.845 kb on - strand, within Dshi_2625 at 2783.864 kb on - strand, within Dshi_2625 at 2783.907 kb on - strand, within Dshi_2625 at 2783.908 kb on + strand, within Dshi_2625 at 2783.933 kb on - strand, within Dshi_2625 at 2783.933 kb on - strand, within Dshi_2625 at 2783.933 kb on - strand, within Dshi_2625 at 2783.933 kb on - strand, within Dshi_2625 at 2783.979 kb on + strand, within Dshi_2625 at 2783.987 kb on - strand, within Dshi_2625 at 2784.146 kb on + strand at 2784.169 kb on + strand at 2784.191 kb on + strand at 2784.239 kb on - strand at 2784.260 kb on - strand at 2784.263 kb on + strand at 2784.263 kb on + strand at 2784.282 kb on - strand, within Dshi_2626 at 2784.698 kb on - strand, within Dshi_2626 at 2784.702 kb on - strand, within Dshi_2626 at 2784.744 kb on + strand, within Dshi_2626 at 2785.228 kb on - strand at 2785.391 kb on - strand at 2785.493 kb on + strand, within Dshi_2627 at 2785.580 kb on + strand, within Dshi_2627 at 2785.588 kb on - strand, within Dshi_2627 at 2785.603 kb on + strand, within Dshi_2627 at 2785.821 kb on + strand, within Dshi_2627 at 2785.931 kb on - strand at 2786.043 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorate 40 mM remove 2,783,349 - +0.6 2,783,377 - -0.1 2,783,523 + Dshi_2624 0.39 -0.1 2,783,526 - Dshi_2624 0.40 -1.9 2,783,526 - Dshi_2624 0.40 +1.7 2,783,531 - Dshi_2624 0.41 +3.5 2,783,531 - Dshi_2624 0.41 +2.5 2,783,536 - Dshi_2624 0.42 +0.6 2,783,582 - Dshi_2624 0.53 +0.9 2,783,687 - Dshi_2624 0.78 +1.9 2,783,694 - Dshi_2624 0.79 -3.2 2,783,845 - Dshi_2625 0.22 -3.4 2,783,864 - Dshi_2625 0.29 +0.9 2,783,907 - Dshi_2625 0.46 +0.9 2,783,908 + Dshi_2625 0.46 -1.4 2,783,933 - Dshi_2625 0.56 +0.9 2,783,933 - Dshi_2625 0.56 +2.5 2,783,933 - Dshi_2625 0.56 -2.3 2,783,933 - Dshi_2625 0.56 -1.9 2,783,979 + Dshi_2625 0.74 +0.9 2,783,987 - Dshi_2625 0.77 +0.1 2,784,146 + -2.1 2,784,169 + -1.6 2,784,191 + +0.7 2,784,239 - -0.5 2,784,260 - -4.3 2,784,263 + -0.6 2,784,263 + +0.9 2,784,282 - Dshi_2626 0.11 -2.3 2,784,698 - Dshi_2626 0.47 +0.9 2,784,702 - Dshi_2626 0.47 +1.2 2,784,744 + Dshi_2626 0.51 -0.1 2,785,228 - -0.7 2,785,391 - -1.1 2,785,493 + Dshi_2627 0.25 +0.9 2,785,580 + Dshi_2627 0.39 -0.7 2,785,588 - Dshi_2627 0.40 -1.1 2,785,603 + Dshi_2627 0.42 -2.2 2,785,821 + Dshi_2627 0.76 +0.9 2,785,931 - +0.7 2,786,043 + -0.1
Or see this region's nucleotide sequence