Experiment: m.b. Chlorate 40 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2468 and Dshi_2469 are separated by 9 nucleotides Dshi_2469 and Dshi_2470 are separated by 12 nucleotides
Dshi_2468: Dshi_2468 - hypothetical protein (RefSeq), at 2,619,421 to 2,620,425
_2468
Dshi_2469: Dshi_2469 - phospho-N-acetylmuramoyl-pentapeptide-transferase (RefSeq), at 2,620,435 to 2,621,520
_2469
Dshi_2470: Dshi_2470 - UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase (RefSeq), at 2,621,533 to 2,622,972
_2470
Position (kb)
2620
2621
2622 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2
3
4 at 2619.447 kb on - strand at 2619.487 kb on + strand at 2619.487 kb on + strand at 2619.490 kb on - strand at 2619.502 kb on + strand at 2619.502 kb on + strand at 2619.512 kb on + strand at 2619.512 kb on + strand at 2619.512 kb on + strand at 2619.512 kb on + strand at 2619.512 kb on + strand at 2619.512 kb on + strand at 2619.512 kb on + strand at 2619.512 kb on + strand at 2619.512 kb on + strand at 2619.512 kb on + strand at 2619.512 kb on + strand at 2619.512 kb on + strand at 2619.520 kb on - strand at 2619.520 kb on - strand at 2619.520 kb on - strand at 2619.520 kb on - strand at 2619.520 kb on - strand at 2619.520 kb on - strand at 2619.520 kb on - strand at 2619.520 kb on - strand at 2619.520 kb on - strand at 2619.520 kb on - strand at 2619.520 kb on - strand at 2619.520 kb on - strand at 2619.520 kb on - strand at 2619.520 kb on - strand at 2619.534 kb on - strand, within Dshi_2468 at 2619.537 kb on - strand, within Dshi_2468 at 2619.552 kb on + strand, within Dshi_2468 at 2619.555 kb on - strand, within Dshi_2468 at 2619.562 kb on + strand, within Dshi_2468 at 2619.572 kb on - strand, within Dshi_2468 at 2619.621 kb on - strand, within Dshi_2468 at 2619.631 kb on + strand, within Dshi_2468 at 2619.634 kb on + strand, within Dshi_2468 at 2619.650 kb on + strand, within Dshi_2468 at 2619.724 kb on + strand, within Dshi_2468 at 2619.757 kb on - strand, within Dshi_2468 at 2619.796 kb on - strand, within Dshi_2468 at 2619.846 kb on - strand, within Dshi_2468 at 2619.846 kb on - strand, within Dshi_2468 at 2619.897 kb on - strand, within Dshi_2468 at 2619.908 kb on + strand, within Dshi_2468 at 2619.993 kb on - strand, within Dshi_2468 at 2620.047 kb on + strand, within Dshi_2468 at 2620.055 kb on - strand, within Dshi_2468 at 2620.131 kb on + strand, within Dshi_2468 at 2620.171 kb on - strand, within Dshi_2468 at 2620.173 kb on + strand, within Dshi_2468 at 2620.181 kb on - strand, within Dshi_2468 at 2620.292 kb on - strand, within Dshi_2468 at 2620.301 kb on - strand, within Dshi_2468 at 2620.338 kb on + strand at 2620.343 kb on + strand at 2620.351 kb on - strand at 2620.418 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorate 40 mM remove 2,619,447 - -0.8 2,619,487 + -2.2 2,619,487 + -2.2 2,619,490 - -2.4 2,619,502 + -1.8 2,619,502 + -2.0 2,619,512 + +0.8 2,619,512 + -0.5 2,619,512 + -0.8 2,619,512 + -0.0 2,619,512 + -2.0 2,619,512 + -0.2 2,619,512 + -1.0 2,619,512 + +0.8 2,619,512 + +0.8 2,619,512 + -3.7 2,619,512 + -0.8 2,619,512 + +0.8 2,619,520 - -0.0 2,619,520 - -1.2 2,619,520 - -1.0 2,619,520 - +0.4 2,619,520 - +0.2 2,619,520 - +0.2 2,619,520 - +0.2 2,619,520 - -0.1 2,619,520 - +0.8 2,619,520 - -0.0 2,619,520 - -0.5 2,619,520 - -1.2 2,619,520 - -0.0 2,619,520 - -1.6 2,619,534 - Dshi_2468 0.11 -0.7 2,619,537 - Dshi_2468 0.12 +1.0 2,619,552 + Dshi_2468 0.13 -5.2 2,619,555 - Dshi_2468 0.13 -0.6 2,619,562 + Dshi_2468 0.14 +0.8 2,619,572 - Dshi_2468 0.15 -0.8 2,619,621 - Dshi_2468 0.20 +0.8 2,619,631 + Dshi_2468 0.21 +0.1 2,619,634 + Dshi_2468 0.21 +0.8 2,619,650 + Dshi_2468 0.23 +1.8 2,619,724 + Dshi_2468 0.30 -2.6 2,619,757 - Dshi_2468 0.33 -0.7 2,619,796 - Dshi_2468 0.37 -0.5 2,619,846 - Dshi_2468 0.42 -0.9 2,619,846 - Dshi_2468 0.42 -0.6 2,619,897 - Dshi_2468 0.47 +2.6 2,619,908 + Dshi_2468 0.48 +0.8 2,619,993 - Dshi_2468 0.57 -1.4 2,620,047 + Dshi_2468 0.62 -1.6 2,620,055 - Dshi_2468 0.63 +0.5 2,620,131 + Dshi_2468 0.71 +0.8 2,620,171 - Dshi_2468 0.75 +0.8 2,620,173 + Dshi_2468 0.75 +2.4 2,620,181 - Dshi_2468 0.76 +0.8 2,620,292 - Dshi_2468 0.87 +3.8 2,620,301 - Dshi_2468 0.88 -0.2 2,620,338 + +1.8 2,620,343 + +0.1 2,620,351 - -2.0 2,620,418 - -1.1
Or see this region's nucleotide sequence