Experiment: m.b. Chlorate 40 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2453 and Dshi_2454 are separated by 43 nucleotides Dshi_2454 and Dshi_2455 overlap by 4 nucleotides
Dshi_2453: Dshi_2453 - hypothetical protein (RefSeq), at 2,597,049 to 2,598,080
_2453
Dshi_2454: Dshi_2454 - hypothetical protein (RefSeq), at 2,598,124 to 2,598,690
_2454
Dshi_2455: Dshi_2455 - AAA ATPase central domain protein (RefSeq), at 2,598,687 to 2,600,012
_2455
Position (kb)
2598
2599 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 2597.127 kb on - strand at 2597.183 kb on - strand, within Dshi_2453 at 2597.241 kb on + strand, within Dshi_2453 at 2597.241 kb on + strand, within Dshi_2453 at 2597.284 kb on + strand, within Dshi_2453 at 2597.455 kb on - strand, within Dshi_2453 at 2597.521 kb on + strand, within Dshi_2453 at 2597.686 kb on + strand, within Dshi_2453 at 2597.835 kb on + strand, within Dshi_2453 at 2597.835 kb on + strand, within Dshi_2453 at 2597.846 kb on + strand, within Dshi_2453 at 2597.854 kb on - strand, within Dshi_2453 at 2597.856 kb on + strand, within Dshi_2453 at 2597.927 kb on + strand, within Dshi_2453 at 2597.990 kb on + strand at 2598.017 kb on + strand at 2598.070 kb on - strand at 2598.193 kb on + strand, within Dshi_2454 at 2598.242 kb on + strand, within Dshi_2454 at 2598.250 kb on - strand, within Dshi_2454 at 2598.316 kb on + strand, within Dshi_2454 at 2598.324 kb on - strand, within Dshi_2454 at 2598.335 kb on + strand, within Dshi_2454 at 2598.357 kb on - strand, within Dshi_2454 at 2598.367 kb on - strand, within Dshi_2454 at 2598.389 kb on - strand, within Dshi_2454 at 2598.480 kb on + strand, within Dshi_2454 at 2598.524 kb on - strand, within Dshi_2454 at 2598.650 kb on - strand at 2598.654 kb on + strand at 2598.795 kb on - strand at 2598.869 kb on + strand, within Dshi_2455 at 2599.001 kb on + strand, within Dshi_2455 at 2599.059 kb on - strand, within Dshi_2455 at 2599.061 kb on + strand, within Dshi_2455 at 2599.145 kb on - strand, within Dshi_2455 at 2599.164 kb on - strand, within Dshi_2455 at 2599.227 kb on - strand, within Dshi_2455 at 2599.242 kb on - strand, within Dshi_2455 at 2599.295 kb on + strand, within Dshi_2455 at 2599.375 kb on - strand, within Dshi_2455 at 2599.375 kb on - strand, within Dshi_2455 at 2599.384 kb on + strand, within Dshi_2455 at 2599.384 kb on + strand, within Dshi_2455 at 2599.400 kb on + strand, within Dshi_2455 at 2599.456 kb on + strand, within Dshi_2455 at 2599.507 kb on - strand, within Dshi_2455 at 2599.545 kb on + strand, within Dshi_2455 at 2599.552 kb on - strand, within Dshi_2455 at 2599.553 kb on - strand, within Dshi_2455 at 2599.562 kb on + strand, within Dshi_2455 at 2599.572 kb on - strand, within Dshi_2455 at 2599.596 kb on - strand, within Dshi_2455
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorate 40 mM remove 2,597,127 - -2.7 2,597,183 - Dshi_2453 0.13 -0.2 2,597,241 + Dshi_2453 0.19 +0.8 2,597,241 + Dshi_2453 0.19 +0.8 2,597,284 + Dshi_2453 0.23 +1.0 2,597,455 - Dshi_2453 0.39 -0.9 2,597,521 + Dshi_2453 0.46 -0.8 2,597,686 + Dshi_2453 0.62 -2.4 2,597,835 + Dshi_2453 0.76 -1.6 2,597,835 + Dshi_2453 0.76 +1.5 2,597,846 + Dshi_2453 0.77 -2.4 2,597,854 - Dshi_2453 0.78 +1.8 2,597,856 + Dshi_2453 0.78 +1.8 2,597,927 + Dshi_2453 0.85 -1.8 2,597,990 + +0.8 2,598,017 + -1.5 2,598,070 - -0.8 2,598,193 + Dshi_2454 0.12 +0.1 2,598,242 + Dshi_2454 0.21 -4.0 2,598,250 - Dshi_2454 0.22 -0.8 2,598,316 + Dshi_2454 0.34 -2.0 2,598,324 - Dshi_2454 0.35 -2.2 2,598,335 + Dshi_2454 0.37 +0.8 2,598,357 - Dshi_2454 0.41 -2.3 2,598,367 - Dshi_2454 0.43 -1.2 2,598,389 - Dshi_2454 0.47 -0.7 2,598,480 + Dshi_2454 0.63 -0.2 2,598,524 - Dshi_2454 0.71 +3.3 2,598,650 - +0.8 2,598,654 + +3.3 2,598,795 - +1.1 2,598,869 + Dshi_2455 0.14 -1.2 2,599,001 + Dshi_2455 0.24 -1.2 2,599,059 - Dshi_2455 0.28 +0.6 2,599,061 + Dshi_2455 0.28 -0.2 2,599,145 - Dshi_2455 0.35 -0.8 2,599,164 - Dshi_2455 0.36 +1.5 2,599,227 - Dshi_2455 0.41 -2.6 2,599,242 - Dshi_2455 0.42 +1.8 2,599,295 + Dshi_2455 0.46 +0.8 2,599,375 - Dshi_2455 0.52 -2.7 2,599,375 - Dshi_2455 0.52 +3.6 2,599,384 + Dshi_2455 0.53 +0.8 2,599,384 + Dshi_2455 0.53 +0.8 2,599,400 + Dshi_2455 0.54 +0.8 2,599,456 + Dshi_2455 0.58 +0.8 2,599,507 - Dshi_2455 0.62 +3.1 2,599,545 + Dshi_2455 0.65 -0.2 2,599,552 - Dshi_2455 0.65 +0.8 2,599,553 - Dshi_2455 0.65 -0.4 2,599,562 + Dshi_2455 0.66 -0.2 2,599,572 - Dshi_2455 0.67 +0.8 2,599,596 - Dshi_2455 0.69 -1.6
Or see this region's nucleotide sequence