Experiment: m.b. Chlorate 40 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1972 and Dshi_1973 are separated by 59 nucleotides Dshi_1973 and Dshi_1974 overlap by 4 nucleotides
Dshi_1972: Dshi_1972 - GntR domain protein (RefSeq), at 2,085,434 to 2,086,216
_1972
Dshi_1973: Dshi_1973 - ATPase associated with various cellular activities AAA_3 (RefSeq), at 2,086,276 to 2,087,394
_1973
Dshi_1974: Dshi_1974 - hypothetical protein (RefSeq), at 2,087,391 to 2,088,665
_1974
Position (kb)
2086
2087
2088 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2085.502 kb on + strand at 2085.576 kb on + strand, within Dshi_1972 at 2085.668 kb on - strand, within Dshi_1972 at 2085.857 kb on + strand, within Dshi_1972 at 2085.922 kb on - strand, within Dshi_1972 at 2086.196 kb on + strand at 2086.243 kb on + strand at 2086.248 kb on + strand at 2086.251 kb on - strand at 2086.469 kb on + strand, within Dshi_1973 at 2086.510 kb on - strand, within Dshi_1973 at 2086.567 kb on - strand, within Dshi_1973 at 2086.578 kb on - strand, within Dshi_1973 at 2086.708 kb on + strand, within Dshi_1973 at 2086.786 kb on + strand, within Dshi_1973 at 2086.875 kb on - strand, within Dshi_1973 at 2086.888 kb on + strand, within Dshi_1973 at 2086.896 kb on - strand, within Dshi_1973 at 2086.968 kb on - strand, within Dshi_1973 at 2086.968 kb on - strand, within Dshi_1973 at 2087.071 kb on - strand, within Dshi_1973 at 2087.220 kb on + strand, within Dshi_1973 at 2087.223 kb on - strand, within Dshi_1973 at 2087.225 kb on - strand, within Dshi_1973 at 2087.340 kb on - strand at 2087.396 kb on - strand at 2087.512 kb on - strand at 2087.568 kb on - strand, within Dshi_1974 at 2087.635 kb on - strand, within Dshi_1974 at 2087.732 kb on - strand, within Dshi_1974 at 2087.763 kb on - strand, within Dshi_1974 at 2087.973 kb on + strand, within Dshi_1974 at 2087.985 kb on + strand, within Dshi_1974 at 2087.993 kb on - strand, within Dshi_1974
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorate 40 mM remove 2,085,502 + -1.0 2,085,576 + Dshi_1972 0.18 +0.2 2,085,668 - Dshi_1972 0.30 -3.3 2,085,857 + Dshi_1972 0.54 -1.4 2,085,922 - Dshi_1972 0.62 +1.0 2,086,196 + -3.5 2,086,243 + +3.5 2,086,248 + -3.0 2,086,251 - -2.6 2,086,469 + Dshi_1973 0.17 +1.0 2,086,510 - Dshi_1973 0.21 +2.0 2,086,567 - Dshi_1973 0.26 -0.1 2,086,578 - Dshi_1973 0.27 +1.4 2,086,708 + Dshi_1973 0.39 -0.9 2,086,786 + Dshi_1973 0.46 +1.0 2,086,875 - Dshi_1973 0.54 -1.4 2,086,888 + Dshi_1973 0.55 -2.4 2,086,896 - Dshi_1973 0.55 -0.6 2,086,968 - Dshi_1973 0.62 -1.5 2,086,968 - Dshi_1973 0.62 -0.2 2,087,071 - Dshi_1973 0.71 +0.4 2,087,220 + Dshi_1973 0.84 +2.0 2,087,223 - Dshi_1973 0.85 -2.7 2,087,225 - Dshi_1973 0.85 +3.3 2,087,340 - +1.0 2,087,396 - -0.4 2,087,512 - -1.8 2,087,568 - Dshi_1974 0.14 -0.6 2,087,635 - Dshi_1974 0.19 +1.0 2,087,732 - Dshi_1974 0.27 +0.4 2,087,763 - Dshi_1974 0.29 +1.0 2,087,973 + Dshi_1974 0.46 -0.2 2,087,985 + Dshi_1974 0.47 +1.0 2,087,993 - Dshi_1974 0.47 -1.4
Or see this region's nucleotide sequence