Experiment: m.b. Chlorate 40 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0994 and Dshi_0995 overlap by 4 nucleotides Dshi_0995 and Dshi_0996 are separated by 100 nucleotides
Dshi_0994: Dshi_0994 - TRAP transporter, 4TM/12TM fusion protein (RefSeq), at 1,023,150 to 1,025,069
_0994
Dshi_0995: Dshi_0995 - transcriptional regulator, LysR family (RefSeq), at 1,025,066 to 1,025,971
_0995
Dshi_0996: Dshi_0996 - NADH/Ubiquinone/plastoquinone (complex I) (RefSeq), at 1,026,072 to 1,027,577
_0996
Position (kb)
1025
1026 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 1024.117 kb on - strand, within Dshi_0994 at 1024.228 kb on + strand, within Dshi_0994 at 1024.233 kb on + strand, within Dshi_0994 at 1024.246 kb on - strand, within Dshi_0994 at 1024.362 kb on + strand, within Dshi_0994 at 1024.455 kb on - strand, within Dshi_0994 at 1024.461 kb on - strand, within Dshi_0994 at 1024.511 kb on + strand, within Dshi_0994 at 1024.672 kb on - strand, within Dshi_0994 at 1024.721 kb on + strand, within Dshi_0994 at 1024.729 kb on - strand, within Dshi_0994 at 1024.785 kb on + strand, within Dshi_0994 at 1024.793 kb on - strand, within Dshi_0994 at 1024.824 kb on - strand, within Dshi_0994 at 1024.897 kb on - strand at 1024.920 kb on + strand at 1024.957 kb on - strand at 1024.987 kb on - strand at 1025.091 kb on + strand at 1025.263 kb on - strand, within Dshi_0995 at 1025.335 kb on - strand, within Dshi_0995 at 1025.335 kb on - strand, within Dshi_0995 at 1025.335 kb on - strand, within Dshi_0995 at 1025.418 kb on + strand, within Dshi_0995 at 1025.459 kb on - strand, within Dshi_0995 at 1025.629 kb on - strand, within Dshi_0995 at 1025.770 kb on + strand, within Dshi_0995 at 1025.818 kb on - strand, within Dshi_0995 at 1025.824 kb on + strand, within Dshi_0995 at 1025.855 kb on + strand, within Dshi_0995 at 1025.947 kb on + strand at 1026.080 kb on + strand at 1026.150 kb on - strand at 1026.393 kb on + strand, within Dshi_0996 at 1026.393 kb on + strand, within Dshi_0996 at 1026.436 kb on - strand, within Dshi_0996 at 1026.460 kb on + strand, within Dshi_0996 at 1026.576 kb on - strand, within Dshi_0996 at 1026.723 kb on - strand, within Dshi_0996 at 1026.733 kb on + strand, within Dshi_0996 at 1026.744 kb on + strand, within Dshi_0996 at 1026.884 kb on - strand, within Dshi_0996 at 1026.884 kb on - strand, within Dshi_0996
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorate 40 mM remove 1,024,117 - Dshi_0994 0.50 +0.9 1,024,228 + Dshi_0994 0.56 +0.9 1,024,233 + Dshi_0994 0.56 +4.2 1,024,246 - Dshi_0994 0.57 +1.1 1,024,362 + Dshi_0994 0.63 +0.9 1,024,455 - Dshi_0994 0.68 -2.1 1,024,461 - Dshi_0994 0.68 +1.4 1,024,511 + Dshi_0994 0.71 +0.9 1,024,672 - Dshi_0994 0.79 -2.3 1,024,721 + Dshi_0994 0.82 -1.1 1,024,729 - Dshi_0994 0.82 -1.8 1,024,785 + Dshi_0994 0.85 -1.3 1,024,793 - Dshi_0994 0.86 +0.3 1,024,824 - Dshi_0994 0.87 +1.0 1,024,897 - -2.1 1,024,920 + -0.7 1,024,957 - +0.8 1,024,987 - -1.5 1,025,091 + -1.9 1,025,263 - Dshi_0995 0.22 -1.7 1,025,335 - Dshi_0995 0.30 -2.1 1,025,335 - Dshi_0995 0.30 -0.7 1,025,335 - Dshi_0995 0.30 -1.4 1,025,418 + Dshi_0995 0.39 +0.9 1,025,459 - Dshi_0995 0.43 +1.9 1,025,629 - Dshi_0995 0.62 -0.1 1,025,770 + Dshi_0995 0.78 -0.1 1,025,818 - Dshi_0995 0.83 -2.3 1,025,824 + Dshi_0995 0.84 +0.9 1,025,855 + Dshi_0995 0.87 +3.2 1,025,947 + +0.9 1,026,080 + +0.9 1,026,150 - +0.9 1,026,393 + Dshi_0996 0.21 +1.1 1,026,393 + Dshi_0996 0.21 -2.8 1,026,436 - Dshi_0996 0.24 +0.9 1,026,460 + Dshi_0996 0.26 +0.9 1,026,576 - Dshi_0996 0.33 +3.5 1,026,723 - Dshi_0996 0.43 -0.1 1,026,733 + Dshi_0996 0.44 +2.1 1,026,744 + Dshi_0996 0.45 -2.8 1,026,884 - Dshi_0996 0.54 -2.8 1,026,884 - Dshi_0996 0.54 +2.1
Or see this region's nucleotide sequence