Experiment: m.b. Chlorate 40 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0686 and Dshi_0687 are separated by 107 nucleotides Dshi_0687 and Dshi_0688 are separated by 141 nucleotides
Dshi_0686: Dshi_0686 - regulatory protein, putative (RefSeq), at 690,358 to 692,448
_0686
Dshi_0687: Dshi_0687 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 692,556 to 693,332
_0687
Dshi_0688: Dshi_0688 - fumarate reductase/succinate dehydrogenase flavoprotein domain protein (RefSeq), at 693,474 to 694,838
_0688
Position (kb) 692
693
694 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 691.661 kb on - strand, within Dshi_0686 at 691.719 kb on + strand, within Dshi_0686 at 691.719 kb on + strand, within Dshi_0686 at 691.727 kb on - strand, within Dshi_0686 at 691.810 kb on + strand, within Dshi_0686 at 691.810 kb on + strand, within Dshi_0686 at 691.818 kb on - strand, within Dshi_0686 at 691.818 kb on - strand, within Dshi_0686 at 691.818 kb on - strand, within Dshi_0686 at 691.837 kb on - strand, within Dshi_0686 at 691.899 kb on + strand, within Dshi_0686 at 691.899 kb on + strand, within Dshi_0686 at 691.913 kb on + strand, within Dshi_0686 at 691.923 kb on + strand, within Dshi_0686 at 691.996 kb on - strand, within Dshi_0686 at 692.196 kb on + strand, within Dshi_0686 at 692.431 kb on + strand at 692.519 kb on + strand at 692.540 kb on + strand at 692.592 kb on + strand at 692.613 kb on - strand at 692.637 kb on + strand, within Dshi_0687 at 692.684 kb on - strand, within Dshi_0687 at 692.684 kb on - strand, within Dshi_0687 at 692.805 kb on + strand, within Dshi_0687 at 692.823 kb on + strand, within Dshi_0687 at 692.956 kb on - strand, within Dshi_0687 at 693.112 kb on + strand, within Dshi_0687 at 693.203 kb on + strand, within Dshi_0687 at 693.232 kb on - strand, within Dshi_0687 at 693.368 kb on - strand at 693.393 kb on + strand at 693.440 kb on + strand at 693.477 kb on + strand at 693.511 kb on - strand at 693.654 kb on - strand, within Dshi_0688 at 693.726 kb on - strand, within Dshi_0688 at 693.761 kb on - strand, within Dshi_0688 at 693.780 kb on - strand at 693.816 kb on + strand, within Dshi_0688 at 693.860 kb on - strand, within Dshi_0688 at 693.969 kb on + strand, within Dshi_0688 at 694.060 kb on - strand, within Dshi_0688 at 694.090 kb on - strand, within Dshi_0688 at 694.112 kb on + strand, within Dshi_0688 at 694.121 kb on + strand, within Dshi_0688 at 694.190 kb on - strand, within Dshi_0688 at 694.241 kb on + strand, within Dshi_0688 at 694.284 kb on - strand, within Dshi_0688 at 694.293 kb on + strand, within Dshi_0688
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorate 40 mM remove 691,661 - Dshi_0686 0.62 -2.6 691,719 + Dshi_0686 0.65 -0.9 691,719 + Dshi_0686 0.65 -1.9 691,727 - Dshi_0686 0.65 -0.1 691,810 + Dshi_0686 0.69 -1.6 691,810 + Dshi_0686 0.69 -1.0 691,818 - Dshi_0686 0.70 -0.6 691,818 - Dshi_0686 0.70 +0.8 691,818 - Dshi_0686 0.70 -0.6 691,837 - Dshi_0686 0.71 -2.1 691,899 + Dshi_0686 0.74 +1.0 691,899 + Dshi_0686 0.74 -2.9 691,913 + Dshi_0686 0.74 +1.1 691,923 + Dshi_0686 0.75 -0.5 691,996 - Dshi_0686 0.78 -0.8 692,196 + Dshi_0686 0.88 -2.0 692,431 + +2.0 692,519 + +1.0 692,540 + +0.2 692,592 + -1.0 692,613 - -2.6 692,637 + Dshi_0687 0.10 -3.2 692,684 - Dshi_0687 0.16 +1.3 692,684 - Dshi_0687 0.16 -3.3 692,805 + Dshi_0687 0.32 -0.6 692,823 + Dshi_0687 0.34 -2.5 692,956 - Dshi_0687 0.51 +3.0 693,112 + Dshi_0687 0.72 -1.4 693,203 + Dshi_0687 0.83 -3.0 693,232 - Dshi_0687 0.87 -2.7 693,368 - -1.4 693,393 + +3.0 693,440 + +0.2 693,477 + +2.0 693,511 - +2.3 693,654 - Dshi_0688 0.13 -2.6 693,726 - Dshi_0688 0.18 -0.4 693,761 - Dshi_0688 0.21 +2.8 693,780 - +1.0 693,816 + Dshi_0688 0.25 -0.9 693,860 - Dshi_0688 0.28 -0.0 693,969 + Dshi_0688 0.36 -1.0 694,060 - Dshi_0688 0.43 -0.0 694,090 - Dshi_0688 0.45 +2.0 694,112 + Dshi_0688 0.47 +2.5 694,121 + Dshi_0688 0.47 -0.0 694,190 - Dshi_0688 0.52 +1.0 694,241 + Dshi_0688 0.56 -1.2 694,284 - Dshi_0688 0.59 -2.0 694,293 + Dshi_0688 0.60 -0.8
Or see this region's nucleotide sequence