Experiment: m.b. Chlorate 40 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0338 and Dshi_0339 are separated by 207 nucleotides Dshi_0339 and Dshi_0340 are separated by 117 nucleotides Dshi_0340 and Dshi_0341 are separated by 11 nucleotides Dshi_0341 and Dshi_0342 are separated by 260 nucleotides
Dshi_0338: Dshi_0338 - beta-lactamase domain protein (RefSeq), at 326,619 to 327,452
_0338
Dshi_0339: Dshi_0339 - protein of unknown function DUF849 (RefSeq), at 327,660 to 328,538
_0339
Dshi_0340: Dshi_0340 - ribosomal protein L31 (RefSeq), at 328,656 to 328,877
_0340
Dshi_0341: Dshi_0341 - ribosomal protein L19 (RefSeq), at 328,889 to 329,263
_0341
Dshi_0342: Dshi_0342 - tRNA (guanine-N1)-methyltransferase (RefSeq), at 329,524 to 330,321
_0342
Position (kb) 327
328
329 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 326.740 kb on + strand, within Dshi_0338 at 326.910 kb on + strand, within Dshi_0338 at 326.995 kb on - strand, within Dshi_0338 at 327.073 kb on - strand, within Dshi_0338 at 327.118 kb on - strand, within Dshi_0338 at 327.247 kb on + strand, within Dshi_0338 at 327.247 kb on + strand, within Dshi_0338 at 327.268 kb on + strand, within Dshi_0338 at 327.556 kb on - strand at 327.575 kb on + strand at 327.759 kb on + strand, within Dshi_0339 at 327.786 kb on + strand, within Dshi_0339 at 327.786 kb on + strand, within Dshi_0339 at 327.794 kb on - strand, within Dshi_0339 at 327.794 kb on - strand, within Dshi_0339 at 327.834 kb on - strand, within Dshi_0339 at 327.920 kb on + strand, within Dshi_0339 at 328.186 kb on - strand, within Dshi_0339 at 328.187 kb on - strand, within Dshi_0339 at 328.247 kb on + strand at 328.303 kb on - strand, within Dshi_0339 at 328.389 kb on - strand, within Dshi_0339 at 328.481 kb on + strand at 328.489 kb on - strand at 328.636 kb on - strand at 329.530 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorate 40 mM remove 326,740 + Dshi_0338 0.15 -3.5 326,910 + Dshi_0338 0.35 +0.8 326,995 - Dshi_0338 0.45 -2.6 327,073 - Dshi_0338 0.54 -0.7 327,118 - Dshi_0338 0.60 +1.8 327,247 + Dshi_0338 0.75 -2.7 327,247 + Dshi_0338 0.75 -0.4 327,268 + Dshi_0338 0.78 -1.7 327,556 - -3.5 327,575 + -3.0 327,759 + Dshi_0339 0.11 -2.6 327,786 + Dshi_0339 0.14 +0.8 327,786 + Dshi_0339 0.14 -0.4 327,794 - Dshi_0339 0.15 -2.3 327,794 - Dshi_0339 0.15 -2.5 327,834 - Dshi_0339 0.20 -2.6 327,920 + Dshi_0339 0.30 -1.6 328,186 - Dshi_0339 0.60 +1.8 328,187 - Dshi_0339 0.60 -2.2 328,247 + -2.0 328,303 - Dshi_0339 0.73 -2.6 328,389 - Dshi_0339 0.83 -4.1 328,481 + +0.8 328,489 - -0.2 328,636 - +0.8 329,530 - -0.3
Or see this region's nucleotide sequence