Experiment: L-Glutamic as (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1737 and HP15_1738 are separated by 170 nucleotides HP15_1738 and HP15_1739 are separated by 38 nucleotides HP15_1739 and HP15_1740 are separated by 53 nucleotides HP15_1740 and HP15_1741 are separated by 38 nucleotides
HP15_1737: HP15_1737 - enoyl-CoA hydratase/isomerase, at 1,835,285 to 1,836,106
_1737
HP15_1738: HP15_1738 - hypothetical protein, at 1,836,277 to 1,836,408
_1738
HP15_1739: HP15_1739 - membrane protein containing DUF6, transmembrane, at 1,836,447 to 1,837,325
_1739
HP15_1740: HP15_1740 - enoyl-CoA hydratase/isomerase, at 1,837,379 to 1,838,182
_1740
HP15_1741: HP15_1741 - hypothetical protein, at 1,838,221 to 1,838,583
_1741
Position (kb)
1836
1837
1838 Strain fitness (log2 ratio)
-1
0
1
2 at 1835.535 kb on + strand, within HP15_1737 at 1835.536 kb on + strand, within HP15_1737 at 1835.562 kb on + strand, within HP15_1737 at 1835.635 kb on + strand, within HP15_1737 at 1835.640 kb on + strand, within HP15_1737 at 1835.640 kb on + strand, within HP15_1737 at 1835.643 kb on - strand, within HP15_1737 at 1835.648 kb on - strand, within HP15_1737 at 1835.648 kb on - strand, within HP15_1737 at 1835.648 kb on - strand, within HP15_1737 at 1835.704 kb on + strand, within HP15_1737 at 1835.877 kb on - strand, within HP15_1737 at 1835.953 kb on + strand, within HP15_1737 at 1836.055 kb on + strand at 1836.140 kb on - strand at 1836.145 kb on + strand at 1836.399 kb on - strand at 1836.419 kb on + strand at 1836.422 kb on - strand at 1836.478 kb on + strand at 1836.606 kb on + strand, within HP15_1739 at 1836.657 kb on + strand, within HP15_1739 at 1836.665 kb on - strand, within HP15_1739 at 1836.665 kb on - strand, within HP15_1739 at 1836.677 kb on - strand, within HP15_1739 at 1836.818 kb on - strand, within HP15_1739 at 1836.836 kb on - strand, within HP15_1739 at 1836.896 kb on - strand, within HP15_1739 at 1836.938 kb on + strand, within HP15_1739 at 1836.981 kb on + strand, within HP15_1739 at 1837.025 kb on + strand, within HP15_1739 at 1837.033 kb on - strand, within HP15_1739 at 1837.033 kb on - strand, within HP15_1739 at 1837.033 kb on - strand, within HP15_1739 at 1837.033 kb on - strand, within HP15_1739 at 1837.084 kb on - strand, within HP15_1739 at 1837.084 kb on - strand, within HP15_1739 at 1837.333 kb on - strand at 1837.442 kb on + strand at 1837.487 kb on - strand, within HP15_1740 at 1837.487 kb on - strand, within HP15_1740 at 1837.518 kb on + strand, within HP15_1740 at 1837.781 kb on + strand, within HP15_1740 at 1837.789 kb on - strand, within HP15_1740 at 1837.789 kb on - strand, within HP15_1740 at 1837.819 kb on + strand, within HP15_1740 at 1837.820 kb on - strand, within HP15_1740 at 1837.890 kb on + strand, within HP15_1740 at 1837.954 kb on - strand, within HP15_1740 at 1838.075 kb on - strand, within HP15_1740 at 1838.075 kb on - strand, within HP15_1740 at 1838.112 kb on - strand at 1838.127 kb on + strand at 1838.135 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic as (N) remove 1,835,535 + HP15_1737 0.30 -0.0 1,835,536 + HP15_1737 0.31 +0.5 1,835,562 + HP15_1737 0.34 -0.1 1,835,635 + HP15_1737 0.43 -0.4 1,835,640 + HP15_1737 0.43 -1.3 1,835,640 + HP15_1737 0.43 +0.4 1,835,643 - HP15_1737 0.44 -0.5 1,835,648 - HP15_1737 0.44 -1.7 1,835,648 - HP15_1737 0.44 +1.1 1,835,648 - HP15_1737 0.44 -0.3 1,835,704 + HP15_1737 0.51 +1.1 1,835,877 - HP15_1737 0.72 +0.3 1,835,953 + HP15_1737 0.81 +0.2 1,836,055 + +0.0 1,836,140 - -0.0 1,836,145 + -0.2 1,836,399 - -0.6 1,836,419 + +1.4 1,836,422 - +0.6 1,836,478 + +1.5 1,836,606 + HP15_1739 0.18 -0.3 1,836,657 + HP15_1739 0.24 +1.0 1,836,665 - HP15_1739 0.25 -0.2 1,836,665 - HP15_1739 0.25 +1.6 1,836,677 - HP15_1739 0.26 +1.9 1,836,818 - HP15_1739 0.42 +1.0 1,836,836 - HP15_1739 0.44 +1.6 1,836,896 - HP15_1739 0.51 +0.7 1,836,938 + HP15_1739 0.56 -0.0 1,836,981 + HP15_1739 0.61 +1.8 1,837,025 + HP15_1739 0.66 +0.5 1,837,033 - HP15_1739 0.67 +1.2 1,837,033 - HP15_1739 0.67 -0.7 1,837,033 - HP15_1739 0.67 +0.1 1,837,033 - HP15_1739 0.67 +1.1 1,837,084 - HP15_1739 0.72 -0.0 1,837,084 - HP15_1739 0.72 +0.0 1,837,333 - -0.4 1,837,442 + -0.3 1,837,487 - HP15_1740 0.13 +0.1 1,837,487 - HP15_1740 0.13 -0.8 1,837,518 + HP15_1740 0.17 +1.8 1,837,781 + HP15_1740 0.50 -0.4 1,837,789 - HP15_1740 0.51 +2.0 1,837,789 - HP15_1740 0.51 +0.2 1,837,819 + HP15_1740 0.55 +2.2 1,837,820 - HP15_1740 0.55 +0.1 1,837,890 + HP15_1740 0.64 -0.2 1,837,954 - HP15_1740 0.72 -0.3 1,838,075 - HP15_1740 0.87 -0.4 1,838,075 - HP15_1740 0.87 +1.5 1,838,112 - +2.4 1,838,127 + -0.8 1,838,135 - +1.7
Or see this region's nucleotide sequence