Experiment: L-Glutamic as (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1324 and HP15_1325 are separated by 72 nucleotides HP15_1325 and HP15_1326 are separated by 475 nucleotides
HP15_1324: HP15_1324 - metallo-beta-lactamase family protein, at 1,387,378 to 1,388,553
_1324
HP15_1325: HP15_1325 - methyl-accepting chemotaxis sensory transducer, at 1,388,626 to 1,390,566
_1325
HP15_1326: HP15_1326 - conserved hypothetical protein, at 1,391,042 to 1,392,823
_1326
Position (kb)
1388
1389
1390
1391 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1387.756 kb on - strand, within HP15_1324 at 1387.917 kb on - strand, within HP15_1324 at 1387.958 kb on + strand, within HP15_1324 at 1387.995 kb on - strand, within HP15_1324 at 1388.077 kb on - strand, within HP15_1324 at 1388.077 kb on - strand, within HP15_1324 at 1388.079 kb on + strand, within HP15_1324 at 1388.122 kb on - strand, within HP15_1324 at 1388.160 kb on + strand, within HP15_1324 at 1388.417 kb on - strand, within HP15_1324 at 1388.515 kb on - strand at 1388.517 kb on + strand at 1388.530 kb on - strand at 1388.827 kb on - strand, within HP15_1325 at 1388.888 kb on - strand, within HP15_1325 at 1388.888 kb on - strand, within HP15_1325 at 1388.888 kb on - strand, within HP15_1325 at 1388.888 kb on - strand, within HP15_1325 at 1388.952 kb on - strand, within HP15_1325 at 1389.000 kb on + strand, within HP15_1325 at 1389.000 kb on + strand, within HP15_1325 at 1389.066 kb on + strand, within HP15_1325 at 1389.069 kb on + strand, within HP15_1325 at 1389.132 kb on - strand, within HP15_1325 at 1389.165 kb on + strand, within HP15_1325 at 1389.359 kb on - strand, within HP15_1325 at 1389.415 kb on - strand, within HP15_1325 at 1389.503 kb on + strand, within HP15_1325 at 1389.511 kb on - strand, within HP15_1325 at 1389.775 kb on - strand, within HP15_1325 at 1389.983 kb on - strand, within HP15_1325 at 1390.115 kb on - strand, within HP15_1325 at 1390.166 kb on + strand, within HP15_1325 at 1390.204 kb on - strand, within HP15_1325 at 1390.240 kb on - strand, within HP15_1325 at 1390.635 kb on - strand at 1390.739 kb on - strand at 1390.741 kb on - strand at 1390.760 kb on - strand at 1390.853 kb on - strand at 1390.920 kb on - strand at 1391.062 kb on + strand at 1391.070 kb on - strand at 1391.096 kb on - strand at 1391.252 kb on + strand, within HP15_1326 at 1391.261 kb on - strand, within HP15_1326 at 1391.265 kb on + strand, within HP15_1326 at 1391.294 kb on - strand, within HP15_1326 at 1391.399 kb on + strand, within HP15_1326 at 1391.406 kb on - strand, within HP15_1326 at 1391.425 kb on + strand, within HP15_1326 at 1391.425 kb on + strand, within HP15_1326 at 1391.438 kb on - strand, within HP15_1326 at 1391.491 kb on + strand, within HP15_1326
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic as (N) remove 1,387,756 - HP15_1324 0.32 -0.3 1,387,917 - HP15_1324 0.46 -0.3 1,387,958 + HP15_1324 0.49 -0.0 1,387,995 - HP15_1324 0.52 +1.6 1,388,077 - HP15_1324 0.59 -0.0 1,388,077 - HP15_1324 0.59 -1.0 1,388,079 + HP15_1324 0.60 -0.5 1,388,122 - HP15_1324 0.63 -0.0 1,388,160 + HP15_1324 0.66 +1.7 1,388,417 - HP15_1324 0.88 +0.1 1,388,515 - -0.7 1,388,517 + +1.8 1,388,530 - +0.2 1,388,827 - HP15_1325 0.10 +0.3 1,388,888 - HP15_1325 0.13 -0.3 1,388,888 - HP15_1325 0.13 -0.6 1,388,888 - HP15_1325 0.13 +0.2 1,388,888 - HP15_1325 0.13 +1.3 1,388,952 - HP15_1325 0.17 -2.2 1,389,000 + HP15_1325 0.19 +1.5 1,389,000 + HP15_1325 0.19 -0.2 1,389,066 + HP15_1325 0.23 +1.5 1,389,069 + HP15_1325 0.23 +1.8 1,389,132 - HP15_1325 0.26 -1.6 1,389,165 + HP15_1325 0.28 -0.2 1,389,359 - HP15_1325 0.38 +1.1 1,389,415 - HP15_1325 0.41 -0.2 1,389,503 + HP15_1325 0.45 +1.9 1,389,511 - HP15_1325 0.46 +1.4 1,389,775 - HP15_1325 0.59 -0.2 1,389,983 - HP15_1325 0.70 -0.7 1,390,115 - HP15_1325 0.77 +1.5 1,390,166 + HP15_1325 0.79 +1.1 1,390,204 - HP15_1325 0.81 -0.7 1,390,240 - HP15_1325 0.83 +1.6 1,390,635 - -0.5 1,390,739 - +0.1 1,390,741 - -0.0 1,390,760 - -0.2 1,390,853 - +1.6 1,390,920 - +0.1 1,391,062 + +0.6 1,391,070 - +0.4 1,391,096 - -0.0 1,391,252 + HP15_1326 0.12 +0.5 1,391,261 - HP15_1326 0.12 +0.0 1,391,265 + HP15_1326 0.13 -0.3 1,391,294 - HP15_1326 0.14 -1.0 1,391,399 + HP15_1326 0.20 +1.4 1,391,406 - HP15_1326 0.20 -0.6 1,391,425 + HP15_1326 0.21 -0.2 1,391,425 + HP15_1326 0.21 -0.0 1,391,438 - HP15_1326 0.22 +0.1 1,391,491 + HP15_1326 0.25 -0.4
Or see this region's nucleotide sequence