Strain Fitness in Dechlorosoma suillum PS around Dsui_3256

Experiment: defined media with 40 mM sodium acetate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_3255 and Dsui_3256 are separated by 35 nucleotidesDsui_3256 and Dsui_3257 overlap by 11 nucleotides Dsui_3255: Dsui_3255 - integral membrane protein MviN, at 3,494,366 to 3,495,910 _3255 Dsui_3256: Dsui_3256 - Raf kinase inhibitor-like protein, YbhB/YbcL family, at 3,495,946 to 3,496,575 _3256 Dsui_3257: Dsui_3257 - bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities, at 3,496,565 to 3,497,710 _3257 Position (kb) 3495 3496 3497Strain fitness (log2 ratio) -1 0 1 2 3at 3495.972 kb on - strandat 3496.018 kb on + strand, within Dsui_3256at 3496.040 kb on + strand, within Dsui_3256at 3496.060 kb on - strandat 3496.062 kb on + strand, within Dsui_3256at 3496.102 kb on - strand, within Dsui_3256at 3496.112 kb on - strand, within Dsui_3256at 3496.197 kb on - strand, within Dsui_3256at 3496.230 kb on - strand, within Dsui_3256at 3496.270 kb on + strand, within Dsui_3256at 3496.368 kb on + strand, within Dsui_3256at 3496.577 kb on - strandat 3496.600 kb on - strandat 3496.603 kb on + strandat 3496.617 kb on - strandat 3496.714 kb on + strand, within Dsui_3257at 3496.722 kb on - strand, within Dsui_3257at 3496.724 kb on + strand, within Dsui_3257at 3496.783 kb on - strand, within Dsui_3257at 3496.812 kb on - strand, within Dsui_3257at 3496.843 kb on - strand, within Dsui_3257at 3496.911 kb on - strandat 3496.980 kb on + strandat 3496.985 kb on + strandat 3496.988 kb on - strand, within Dsui_3257at 3497.034 kb on - strand, within Dsui_3257at 3497.063 kb on + strand, within Dsui_3257at 3497.126 kb on + strand, within Dsui_3257at 3497.138 kb on - strand, within Dsui_3257at 3497.160 kb on - strand, within Dsui_3257at 3497.290 kb on + strandat 3497.290 kb on + strandat 3497.290 kb on + strand, within Dsui_3257at 3497.314 kb on + strandat 3497.356 kb on - strand, within Dsui_3257at 3497.363 kb on - strand, within Dsui_3257at 3497.397 kb on - strand, within Dsui_3257at 3497.397 kb on - strand, within Dsui_3257at 3497.412 kb on - strand, within Dsui_3257at 3497.427 kb on - strand, within Dsui_3257at 3497.574 kb on + strand, within Dsui_3257

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Per-strain Table

Position Strand Gene LocusTag Fraction defined media with 40 mM sodium acetate
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3,495,972 - +3.0
3,496,018 + Dsui_3256 0.11 -0.0
3,496,040 + Dsui_3256 0.15 +0.5
3,496,060 - +1.0
3,496,062 + Dsui_3256 0.18 +0.2
3,496,102 - Dsui_3256 0.25 -0.2
3,496,112 - Dsui_3256 0.26 -0.0
3,496,197 - Dsui_3256 0.40 +0.5
3,496,230 - Dsui_3256 0.45 -0.8
3,496,270 + Dsui_3256 0.51 +0.2
3,496,368 + Dsui_3256 0.67 -0.3
3,496,577 - +0.6
3,496,600 - +0.6
3,496,603 + -0.7
3,496,617 - +0.0
3,496,714 + Dsui_3257 0.13 +0.1
3,496,722 - Dsui_3257 0.14 -0.4
3,496,724 + Dsui_3257 0.14 +0.2
3,496,783 - Dsui_3257 0.19 +0.0
3,496,812 - Dsui_3257 0.22 -0.3
3,496,843 - Dsui_3257 0.24 +0.6
3,496,911 - +1.0
3,496,980 + -0.0
3,496,985 + +1.2
3,496,988 - Dsui_3257 0.37 -0.2
3,497,034 - Dsui_3257 0.41 +1.0
3,497,063 + Dsui_3257 0.43 +0.6
3,497,126 + Dsui_3257 0.49 +1.6
3,497,138 - Dsui_3257 0.50 +0.0
3,497,160 - Dsui_3257 0.52 +0.4
3,497,290 + +2.6
3,497,290 + -0.4
3,497,290 + Dsui_3257 0.63 -0.4
3,497,314 + +2.0
3,497,356 - Dsui_3257 0.69 +0.8
3,497,363 - Dsui_3257 0.70 -0.1
3,497,397 - Dsui_3257 0.73 +0.0
3,497,397 - Dsui_3257 0.73 +0.9
3,497,412 - Dsui_3257 0.74 +0.0
3,497,427 - Dsui_3257 0.75 +0.1
3,497,574 + Dsui_3257 0.88 +0.4

Or see this region's nucleotide sequence