Experiment: defined media with 40 mM sodium acetate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3255 and Dsui_3256 are separated by 35 nucleotides Dsui_3256 and Dsui_3257 overlap by 11 nucleotides
Dsui_3255: Dsui_3255 - integral membrane protein MviN, at 3,494,366 to 3,495,910
_3255
Dsui_3256: Dsui_3256 - Raf kinase inhibitor-like protein, YbhB/YbcL family, at 3,495,946 to 3,496,575
_3256
Dsui_3257: Dsui_3257 - bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities, at 3,496,565 to 3,497,710
_3257
Position (kb)
3495
3496
3497 Strain fitness (log2 ratio)
-1
0
1
2
3 at 3495.972 kb on - strand at 3496.018 kb on + strand, within Dsui_3256 at 3496.040 kb on + strand, within Dsui_3256 at 3496.060 kb on - strand at 3496.062 kb on + strand, within Dsui_3256 at 3496.102 kb on - strand, within Dsui_3256 at 3496.112 kb on - strand, within Dsui_3256 at 3496.197 kb on - strand, within Dsui_3256 at 3496.230 kb on - strand, within Dsui_3256 at 3496.270 kb on + strand, within Dsui_3256 at 3496.368 kb on + strand, within Dsui_3256 at 3496.577 kb on - strand at 3496.600 kb on - strand at 3496.603 kb on + strand at 3496.617 kb on - strand at 3496.714 kb on + strand, within Dsui_3257 at 3496.722 kb on - strand, within Dsui_3257 at 3496.724 kb on + strand, within Dsui_3257 at 3496.783 kb on - strand, within Dsui_3257 at 3496.812 kb on - strand, within Dsui_3257 at 3496.843 kb on - strand, within Dsui_3257 at 3496.911 kb on - strand at 3496.980 kb on + strand at 3496.985 kb on + strand at 3496.988 kb on - strand, within Dsui_3257 at 3497.034 kb on - strand, within Dsui_3257 at 3497.063 kb on + strand, within Dsui_3257 at 3497.126 kb on + strand, within Dsui_3257 at 3497.138 kb on - strand, within Dsui_3257 at 3497.160 kb on - strand, within Dsui_3257 at 3497.290 kb on + strand at 3497.290 kb on + strand at 3497.290 kb on + strand, within Dsui_3257 at 3497.314 kb on + strand at 3497.356 kb on - strand, within Dsui_3257 at 3497.363 kb on - strand, within Dsui_3257 at 3497.397 kb on - strand, within Dsui_3257 at 3497.397 kb on - strand, within Dsui_3257 at 3497.412 kb on - strand, within Dsui_3257 at 3497.427 kb on - strand, within Dsui_3257 at 3497.574 kb on + strand, within Dsui_3257
Per-strain Table
Position Strand Gene LocusTag Fraction defined media with 40 mM sodium acetate remove 3,495,972 - +3.0 3,496,018 + Dsui_3256 0.11 -0.0 3,496,040 + Dsui_3256 0.15 +0.5 3,496,060 - +1.0 3,496,062 + Dsui_3256 0.18 +0.2 3,496,102 - Dsui_3256 0.25 -0.2 3,496,112 - Dsui_3256 0.26 -0.0 3,496,197 - Dsui_3256 0.40 +0.5 3,496,230 - Dsui_3256 0.45 -0.8 3,496,270 + Dsui_3256 0.51 +0.2 3,496,368 + Dsui_3256 0.67 -0.3 3,496,577 - +0.6 3,496,600 - +0.6 3,496,603 + -0.7 3,496,617 - +0.0 3,496,714 + Dsui_3257 0.13 +0.1 3,496,722 - Dsui_3257 0.14 -0.4 3,496,724 + Dsui_3257 0.14 +0.2 3,496,783 - Dsui_3257 0.19 +0.0 3,496,812 - Dsui_3257 0.22 -0.3 3,496,843 - Dsui_3257 0.24 +0.6 3,496,911 - +1.0 3,496,980 + -0.0 3,496,985 + +1.2 3,496,988 - Dsui_3257 0.37 -0.2 3,497,034 - Dsui_3257 0.41 +1.0 3,497,063 + Dsui_3257 0.43 +0.6 3,497,126 + Dsui_3257 0.49 +1.6 3,497,138 - Dsui_3257 0.50 +0.0 3,497,160 - Dsui_3257 0.52 +0.4 3,497,290 + +2.6 3,497,290 + -0.4 3,497,290 + Dsui_3257 0.63 -0.4 3,497,314 + +2.0 3,497,356 - Dsui_3257 0.69 +0.8 3,497,363 - Dsui_3257 0.70 -0.1 3,497,397 - Dsui_3257 0.73 +0.0 3,497,397 - Dsui_3257 0.73 +0.9 3,497,412 - Dsui_3257 0.74 +0.0 3,497,427 - Dsui_3257 0.75 +0.1 3,497,574 + Dsui_3257 0.88 +0.4
Or see this region's nucleotide sequence