Experiment: defined media with 40 mM sodium acetate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0931 and Dsui_0932 are separated by 15 nucleotides Dsui_0932 and Dsui_0933 are separated by 196 nucleotides Dsui_0933 and Dsui_0934 are separated by 167 nucleotides Dsui_0934 and Dsui_0935 are separated by 107 nucleotides
Dsui_0931: Dsui_0931 - thiol-disulfide isomerase-like thioredoxin, at 959,966 to 960,472
_0931
Dsui_0932: Dsui_0932 - hypothetical protein, at 960,488 to 961,192
_0932
Dsui_0933: Dsui_0933 - DNA/RNA helicase, superfamily I, at 961,389 to 963,398
_0933
Dsui_0934: Dsui_0934 - hypothetical protein, at 963,566 to 963,862
_0934
Dsui_0935: Dsui_0935 - cytochrome c5, at 963,970 to 964,413
_0935
Position (kb) 961
962
963
964 Strain fitness (log2 ratio) -1
0
1
2 at 960.445 kb on + strand at 960.445 kb on + strand at 960.448 kb on - strand at 960.453 kb on - strand at 960.453 kb on - strand at 960.575 kb on + strand, within Dsui_0932 at 960.597 kb on - strand, within Dsui_0932 at 960.663 kb on - strand, within Dsui_0932 at 960.711 kb on + strand, within Dsui_0932 at 960.870 kb on - strand, within Dsui_0932 at 961.001 kb on - strand, within Dsui_0932 at 961.032 kb on - strand at 961.087 kb on - strand, within Dsui_0932 at 961.089 kb on + strand, within Dsui_0932 at 961.089 kb on + strand, within Dsui_0932 at 961.089 kb on + strand, within Dsui_0932 at 961.097 kb on - strand, within Dsui_0932 at 961.097 kb on - strand, within Dsui_0932 at 961.122 kb on - strand at 961.177 kb on - strand at 961.346 kb on - strand at 961.404 kb on + strand at 963.401 kb on - strand at 963.412 kb on - strand at 963.454 kb on - strand at 963.952 kb on + strand at 963.971 kb on + strand at 964.013 kb on - strand at 964.026 kb on + strand, within Dsui_0935 at 964.077 kb on + strand, within Dsui_0935 at 964.091 kb on - strand, within Dsui_0935 at 964.132 kb on + strand, within Dsui_0935 at 964.316 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction defined media with 40 mM sodium acetate remove 960,445 + +0.2 960,445 + +0.1 960,448 - -0.3 960,453 - +0.2 960,453 - +0.3 960,575 + Dsui_0932 0.12 +0.5 960,597 - Dsui_0932 0.15 +0.3 960,663 - Dsui_0932 0.25 +0.5 960,711 + Dsui_0932 0.32 +0.4 960,870 - Dsui_0932 0.54 +0.4 961,001 - Dsui_0932 0.73 +0.2 961,032 - +1.3 961,087 - Dsui_0932 0.85 +0.0 961,089 + Dsui_0932 0.85 -0.2 961,089 + Dsui_0932 0.85 -0.5 961,089 + Dsui_0932 0.85 +2.0 961,097 - Dsui_0932 0.86 -0.2 961,097 - Dsui_0932 0.86 -0.5 961,122 - +0.2 961,177 - -0.3 961,346 - -0.0 961,404 + +0.3 963,401 - +0.2 963,412 - +0.1 963,454 - -0.2 963,952 + -0.5 963,971 + +0.0 964,013 - -0.0 964,026 + Dsui_0935 0.13 -1.7 964,077 + Dsui_0935 0.24 -0.2 964,091 - Dsui_0935 0.27 +0.0 964,132 + Dsui_0935 0.36 -0.6 964,316 + +1.3
Or see this region's nucleotide sequence