Experiment: defined media with 40 mM sodium acetate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0255 and Dsui_0256 are separated by 192 nucleotides Dsui_0256 and Dsui_0257 are separated by 46 nucleotides Dsui_0257 and Dsui_0258 are separated by 194 nucleotides
Dsui_0255: Dsui_0255 - hypothetical protein, at 253,221 to 254,048
_0255
Dsui_0256: Dsui_0256 - glutathione peroxidase, at 254,241 to 254,810
_0256
Dsui_0257: Dsui_0257 - hypothetical protein, at 254,857 to 255,660
_0257
Dsui_0258: Dsui_0258 - sulfate ABC transporter, ATP-binding protein, at 255,855 to 256,937
_0258
Position (kb) 254
255
256 Strain fitness (log2 ratio) -1
0
1
2 at 253.959 kb on - strand, within Dsui_0255 at 254.056 kb on - strand at 254.084 kb on + strand at 254.084 kb on + strand at 254.084 kb on + strand at 254.084 kb on + strand at 254.084 kb on + strand at 254.084 kb on + strand at 254.084 kb on + strand at 254.084 kb on + strand at 254.084 kb on + strand at 254.084 kb on + strand at 254.084 kb on + strand at 254.084 kb on + strand at 254.084 kb on + strand at 254.084 kb on + strand at 254.090 kb on - strand at 254.092 kb on - strand at 254.092 kb on - strand at 254.092 kb on - strand at 254.092 kb on - strand at 254.092 kb on - strand at 254.092 kb on - strand at 254.092 kb on - strand at 254.092 kb on - strand at 254.092 kb on - strand at 254.092 kb on - strand at 254.092 kb on - strand at 254.138 kb on - strand at 254.155 kb on - strand at 254.218 kb on + strand at 254.222 kb on + strand at 254.417 kb on + strand, within Dsui_0256 at 254.425 kb on - strand, within Dsui_0256 at 254.490 kb on + strand, within Dsui_0256 at 254.498 kb on - strand, within Dsui_0256 at 254.607 kb on - strand, within Dsui_0256 at 254.609 kb on + strand, within Dsui_0256 at 254.644 kb on + strand, within Dsui_0256 at 254.655 kb on + strand, within Dsui_0256 at 254.666 kb on + strand, within Dsui_0256 at 254.669 kb on - strand, within Dsui_0256 at 254.822 kb on + strand at 254.893 kb on + strand at 255.020 kb on - strand, within Dsui_0257 at 255.047 kb on - strand, within Dsui_0257 at 255.286 kb on + strand, within Dsui_0257 at 255.287 kb on + strand, within Dsui_0257 at 255.399 kb on + strand, within Dsui_0257 at 255.401 kb on - strand, within Dsui_0257 at 255.435 kb on + strand, within Dsui_0257 at 255.496 kb on + strand, within Dsui_0257 at 255.548 kb on - strand, within Dsui_0257 at 255.632 kb on + strand at 255.632 kb on + strand at 255.734 kb on - strand at 256.030 kb on + strand, within Dsui_0258 at 256.093 kb on + strand, within Dsui_0258 at 256.131 kb on + strand, within Dsui_0258 at 256.178 kb on + strand, within Dsui_0258 at 256.178 kb on + strand, within Dsui_0258 at 256.435 kb on - strand, within Dsui_0258 at 256.494 kb on + strand at 256.565 kb on + strand, within Dsui_0258 at 256.570 kb on + strand, within Dsui_0258 at 256.588 kb on - strand, within Dsui_0258
Per-strain Table
Position Strand Gene LocusTag Fraction defined media with 40 mM sodium acetate remove 253,959 - Dsui_0255 0.89 +0.0 254,056 - -0.8 254,084 + +1.0 254,084 + -0.6 254,084 + -1.7 254,084 + +1.0 254,084 + +2.0 254,084 + -0.8 254,084 + +1.0 254,084 + -0.6 254,084 + -0.3 254,084 + +0.4 254,084 + +0.0 254,084 + +0.4 254,084 + -0.8 254,084 + +1.2 254,090 - +0.5 254,092 - -0.2 254,092 - +0.1 254,092 - -0.2 254,092 - +0.0 254,092 - -0.1 254,092 - +0.2 254,092 - +0.0 254,092 - +0.1 254,092 - -0.4 254,092 - +0.3 254,092 - -0.3 254,138 - +0.4 254,155 - +0.3 254,218 + -0.2 254,222 + +1.0 254,417 + Dsui_0256 0.31 -0.2 254,425 - Dsui_0256 0.32 +0.1 254,490 + Dsui_0256 0.44 +0.1 254,498 - Dsui_0256 0.45 -0.4 254,607 - Dsui_0256 0.64 +0.3 254,609 + Dsui_0256 0.65 +0.4 254,644 + Dsui_0256 0.71 +0.1 254,655 + Dsui_0256 0.73 -0.6 254,666 + Dsui_0256 0.75 +0.0 254,669 - Dsui_0256 0.75 -0.0 254,822 + -0.4 254,893 + -1.1 255,020 - Dsui_0257 0.20 +0.3 255,047 - Dsui_0257 0.24 +0.4 255,286 + Dsui_0257 0.53 +0.7 255,287 + Dsui_0257 0.53 +0.1 255,399 + Dsui_0257 0.67 +0.8 255,401 - Dsui_0257 0.68 +0.5 255,435 + Dsui_0257 0.72 -0.6 255,496 + Dsui_0257 0.79 +0.3 255,548 - Dsui_0257 0.86 +0.3 255,632 + -1.1 255,632 + -0.4 255,734 - +0.5 256,030 + Dsui_0258 0.16 +0.1 256,093 + Dsui_0258 0.22 -1.2 256,131 + Dsui_0258 0.25 +0.4 256,178 + Dsui_0258 0.30 +0.2 256,178 + Dsui_0258 0.30 -1.0 256,435 - Dsui_0258 0.54 -0.3 256,494 + -0.8 256,565 + Dsui_0258 0.66 -0.1 256,570 + Dsui_0258 0.66 -1.4 256,588 - Dsui_0258 0.68 -0.4
Or see this region's nucleotide sequence