Experiment: defined media with 40 mM sodium acetate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0220 and Dsui_0221 are separated by 142 nucleotides Dsui_0221 and Dsui_0222 are separated by 126 nucleotides Dsui_0222 and Dsui_0223 are separated by 7 nucleotides Dsui_0223 and Dsui_0224 are separated by 9 nucleotides
Dsui_0220: Dsui_0220 - 2-phosphoglycolate phosphatase, at 219,055 to 219,717
_0220
Dsui_0221: Dsui_0221 - ribulose-phosphate 3-epimerase, at 219,860 to 220,549
_0221
Dsui_0222: Dsui_0222 - uncharacterized protein affecting Mg2+/Co2+ transport, at 220,676 to 221,059
_0222
Dsui_0223: Dsui_0223 - methylase involved in ubiquinone/menaquinone biosynthesis, at 221,067 to 221,660
_0223
Dsui_0224: Dsui_0224 - transcriptional regulator, at 221,670 to 222,575
_0224
Position (kb) 220
221
222 Strain fitness (log2 ratio) -1
0
1
2
3 at 219.708 kb on + strand at 219.762 kb on - strand at 219.772 kb on + strand at 220.619 kb on + strand at 220.628 kb on + strand at 220.651 kb on - strand at 220.660 kb on + strand at 220.667 kb on + strand at 220.667 kb on + strand at 220.667 kb on + strand at 220.668 kb on - strand at 220.731 kb on - strand, within Dsui_0222 at 220.782 kb on - strand, within Dsui_0222 at 220.865 kb on + strand, within Dsui_0222 at 220.977 kb on + strand, within Dsui_0222 at 221.013 kb on - strand, within Dsui_0222 at 221.083 kb on + strand at 221.091 kb on - strand at 221.096 kb on - strand at 221.165 kb on + strand, within Dsui_0223 at 221.368 kb on + strand, within Dsui_0223 at 221.384 kb on + strand, within Dsui_0223 at 221.411 kb on + strand, within Dsui_0223 at 221.431 kb on + strand, within Dsui_0223 at 221.499 kb on + strand, within Dsui_0223 at 221.520 kb on + strand, within Dsui_0223 at 221.589 kb on - strand, within Dsui_0223 at 221.732 kb on - strand at 221.804 kb on + strand, within Dsui_0224 at 221.863 kb on - strand, within Dsui_0224 at 221.990 kb on - strand, within Dsui_0224 at 222.005 kb on - strand, within Dsui_0224
Per-strain Table
Position Strand Gene LocusTag Fraction defined media with 40 mM sodium acetate remove 219,708 + +3.1 219,762 - -0.0 219,772 + -0.3 220,619 + -0.2 220,628 + +1.2 220,651 - -0.2 220,660 + +0.2 220,667 + -0.5 220,667 + -0.9 220,667 + -0.2 220,668 - -0.3 220,731 - Dsui_0222 0.14 -0.5 220,782 - Dsui_0222 0.28 +0.2 220,865 + Dsui_0222 0.49 -0.8 220,977 + Dsui_0222 0.78 -1.3 221,013 - Dsui_0222 0.88 -0.5 221,083 + +0.2 221,091 - +0.2 221,096 - -0.2 221,165 + Dsui_0223 0.16 +0.6 221,368 + Dsui_0223 0.51 -0.1 221,384 + Dsui_0223 0.53 +0.0 221,411 + Dsui_0223 0.58 +0.1 221,431 + Dsui_0223 0.61 +0.1 221,499 + Dsui_0223 0.73 +0.5 221,520 + Dsui_0223 0.76 -0.0 221,589 - Dsui_0223 0.88 +0.1 221,732 - +0.2 221,804 + Dsui_0224 0.15 +0.0 221,863 - Dsui_0224 0.21 +0.4 221,990 - Dsui_0224 0.35 -0.4 222,005 - Dsui_0224 0.37 -0.9
Or see this region's nucleotide sequence