Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_3107
Experiment: MoYLS4 with Carbenicillin 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Carbenicillin 0.0625 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,917,705 | - | DvMF_3106 | 0.35 | +0.5 | |
3,918,110 | + | DvMF_3106 | 0.76 | -0.1 | |
3,918,111 | - | DvMF_3106 | 0.76 | -0.1 | |
3,918,242 | + | DvMF_3106 | 0.89 | -0.3 | |
3,918,263 | + | -0.4 | |||
3,918,273 | - | -0.0 | |||
3,918,658 | - | -0.6 | |||
3,918,676 | + | +1.5 | |||
3,918,692 | + | -0.6 | |||
3,919,185 | - | DvMF_3107 | 0.66 | -0.1 | |
3,919,220 | + | DvMF_3107 | 0.71 | -0.3 | |
3,919,353 | + | DvMF_3107 | 0.88 | -0.4 | |
3,919,512 | - | -0.7 | |||
3,919,579 | + | -0.8 | |||
3,919,969 | - | DvMF_3108 | 0.38 | +0.1 | |
3,920,010 | + | DvMF_3108 | 0.42 | -0.3 | |
3,920,134 | + | DvMF_3108 | 0.54 | -0.3 | |
3,920,304 | + | DvMF_3108 | 0.71 | +0.0 | |
3,920,400 | - | DvMF_3108 | 0.80 | -0.3 |
Or see this region's nucleotide sequence