Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2348
Experiment: MoYLS4 with Carbenicillin 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Carbenicillin 0.0625 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,957,322 | + | DvMF_2347 | 0.41 | -0.2 | |
2,957,470 | + | DvMF_2347 | 0.57 | -0.4 | |
2,957,604 | - | DvMF_2347 | 0.72 | -0.2 | |
2,957,715 | + | DvMF_2347 | 0.83 | -0.2 | |
2,957,845 | + | -0.3 | |||
2,957,900 | - | -0.4 | |||
2,958,052 | + | -0.3 | |||
2,958,113 | + | -0.7 | |||
2,958,113 | - | -0.3 | |||
2,958,241 | + | -0.4 | |||
2,958,563 | - | DvMF_2348 | 0.34 | +0.1 | |
2,958,596 | - | DvMF_2348 | 0.38 | -0.6 | |
2,958,694 | - | DvMF_2348 | 0.48 | +0.5 | |
2,958,731 | + | DvMF_2348 | 0.53 | -0.4 | |
2,958,759 | + | DvMF_2348 | 0.56 | +0.0 | |
2,958,767 | - | DvMF_2348 | 0.56 | -0.4 | |
2,958,780 | + | DvMF_2348 | 0.58 | +0.2 | |
2,958,897 | + | DvMF_2348 | 0.71 | -0.4 | |
2,959,121 | - | -0.5 | |||
2,959,430 | + | DvMF_2349 | 0.28 | -0.5 | |
2,959,438 | - | DvMF_2349 | 0.29 | +0.5 | |
2,959,478 | - | DvMF_2349 | 0.33 | -0.2 | |
2,959,478 | - | DvMF_2349 | 0.33 | -0.4 | |
2,959,531 | - | DvMF_2349 | 0.40 | -0.1 | |
2,959,907 | - | DvMF_2349 | 0.84 | -0.7 | |
2,960,012 | - | -0.8 | |||
2,960,034 | + | -0.3 |
Or see this region's nucleotide sequence