Experiment: MoYLS4 with Carbenicillin 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2166 and DvMF_2167 are separated by 121 nucleotides DvMF_2167 and DvMF_2168 are separated by 204 nucleotides DvMF_2168 and DvMF_2169 are separated by 446 nucleotides
DvMF_2166: DvMF_2166 - protein of unknown function DUF169 (RefSeq), at 2,702,663 to 2,703,508
_2166
DvMF_2167: DvMF_2167 - transcriptional regulator, MarR family (RefSeq), at 2,703,630 to 2,704,115
_2167
DvMF_2168: DvMF_2168 - transcriptional regulator, TraR/DksA family (RefSeq), at 2,704,320 to 2,704,748
_2168
DvMF_2169: DvMF_2169 - phospholipid/glycerol acyltransferase (RefSeq), at 2,705,195 to 2,707,183
_2169
Position (kb)
2704
2705 Strain fitness (log2 ratio)
-1
0
1
2
3 at 2703.429 kb on + strand at 2703.431 kb on + strand at 2703.746 kb on + strand, within DvMF_2167 at 2703.870 kb on - strand, within DvMF_2167 at 2703.917 kb on + strand, within DvMF_2167 at 2704.013 kb on - strand, within DvMF_2167 at 2704.177 kb on - strand at 2704.191 kb on + strand at 2704.356 kb on - strand at 2704.400 kb on + strand, within DvMF_2168 at 2704.428 kb on + strand, within DvMF_2168 at 2704.433 kb on + strand, within DvMF_2168 at 2704.433 kb on + strand, within DvMF_2168 at 2704.530 kb on + strand, within DvMF_2168 at 2704.546 kb on - strand, within DvMF_2168 at 2704.750 kb on + strand at 2705.237 kb on - strand at 2705.381 kb on + strand at 2705.389 kb on - strand at 2705.522 kb on - strand, within DvMF_2169 at 2705.533 kb on - strand, within DvMF_2169 at 2705.744 kb on + strand, within DvMF_2169
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Carbenicillin 0.0625 mg/ml remove 2,703,429 + +0.5 2,703,431 + -0.2 2,703,746 + DvMF_2167 0.24 +3.2 2,703,870 - DvMF_2167 0.49 +3.5 2,703,917 + DvMF_2167 0.59 +3.3 2,704,013 - DvMF_2167 0.79 +3.3 2,704,177 - -0.1 2,704,191 + -0.5 2,704,356 - -0.4 2,704,400 + DvMF_2168 0.19 -0.1 2,704,428 + DvMF_2168 0.25 -0.3 2,704,433 + DvMF_2168 0.26 -0.8 2,704,433 + DvMF_2168 0.26 -0.9 2,704,530 + DvMF_2168 0.49 -0.3 2,704,546 - DvMF_2168 0.53 -0.5 2,704,750 + -0.1 2,705,237 - +0.5 2,705,381 + -1.0 2,705,389 - -0.1 2,705,522 - DvMF_2169 0.16 -0.1 2,705,533 - DvMF_2169 0.17 -0.5 2,705,744 + DvMF_2169 0.28 -0.1
Or see this region's nucleotide sequence