Strain Fitness in Shewanella amazonensis SB2B around Sama_2415

Experiment: Gly-Glu

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gly-Glu
2,901,421	+				+0.6
2,901,421	+				+0.5
2,901,546	+				+0.5
2,901,546	+				+0.3
2,901,546	+				+0.8
2,901,547	-				+0.9
2,901,547	-				+0.5
2,901,547	-				+0.2
2,901,547	-				+1.3
2,901,547	-				-1.9
2,901,547	-				-1.5
2,901,547	-				+0.1
2,901,547	-				+2.3
2,901,547	-				+0.1
2,901,548	+				-0.0
2,901,549	-				+0.8
2,901,549	-				+0.5
2,901,549	-				-1.3
2,901,549	-				-0.2
2,901,558	+				-1.5
2,901,558	+				-0.4
2,901,559	-				+0.9
2,901,559	-				-1.3
2,901,560	+				-0.0
2,901,561	-				-0.4
2,901,561	-				-2.7
2,901,606	+				-1.3
2,901,606	+				-0.0
2,901,642	+				+0.1
2,901,643	-				+0.2
2,901,643	-				-0.2
2,901,658	-				-1.3
2,901,673	+				-0.4
2,901,673	+				-0.4
2,901,673	+				-1.1
2,901,674	-				+0.4
2,901,676	+				-0.5
2,901,677	-				+0.1
2,901,695	+				+0.9
2,901,695	+				-0.8
2,901,695	+				-0.5
2,901,695	+				+0.7
2,901,695	+				+0.7
2,901,696	-				+1.5
2,901,696	-				+0.6
2,901,696	-				-0.9
2,901,696	-				-0.3
2,901,696	-				+0.5
2,901,696	-				+2.5
2,901,696	-				-0.1
2,901,696	-				+0.9
2,901,718	+				+0.8
2,901,719	-				+0.7
2,901,719	-				-1.3
2,901,719	-				-0.1
2,901,750	+				-0.3
2,901,779	-				-1.4
2,901,833	-				+0.1
2,901,859	+				+0.1
2,901,860	-				+0.5
2,901,860	-				+0.3
2,901,868	+				+1.2
2,901,992	+		Sama_2414	0.27	-0.5
2,901,993	-		Sama_2414	0.28	-0.5
2,901,993	-		Sama_2414	0.28	-1.5
2,902,057	+		Sama_2414	0.42	+1.1
2,902,057	+		Sama_2414	0.42	+1.7
2,902,057	+		Sama_2414	0.42	+0.1
2,902,057	+		Sama_2414	0.42	-0.5
2,902,058	-		Sama_2414	0.42	-1.9
2,902,058	-		Sama_2414	0.42	-0.5
2,902,058	-		Sama_2414	0.42	-0.4
2,902,088	-		Sama_2414	0.49	-1.3
2,902,088	-		Sama_2414	0.49	+0.7
2,902,109	+		Sama_2414	0.54	-0.8
2,902,110	-		Sama_2414	0.54	-1.0
2,902,169	+		Sama_2414	0.68	-1.5
2,902,169	+		Sama_2414	0.68	-0.2
2,902,169	+		Sama_2414	0.68	+2.1
2,902,169	+		Sama_2414	0.68	+0.4
2,902,169	+		Sama_2414	0.68	-2.3
2,902,169	+		Sama_2414	0.68	-1.0
2,902,169	+		Sama_2414	0.68	-0.2
2,902,169	+		Sama_2414	0.68	-0.0
2,902,169	+		Sama_2414	0.68	+0.8
2,902,169	+		Sama_2414	0.68	-0.3
2,902,170	-		Sama_2414	0.68	+0.2
2,902,170	-		Sama_2414	0.68	+0.2
2,902,170	-		Sama_2414	0.68	+0.4
2,902,170	-		Sama_2414	0.68	+1.4
2,902,170	-		Sama_2414	0.68	-2.1
2,902,170	-		Sama_2414	0.68	+0.1
2,902,170	-		Sama_2414	0.68	+0.1
2,902,170	-		Sama_2414	0.68	-0.9
2,902,170	+		Sama_2414	0.68	+1.1
2,902,170	-		Sama_2414	0.68	+0.8
2,902,170	-		Sama_2414	0.68	-0.1
2,902,170	-		Sama_2414	0.68	-1.0
2,902,170	-		Sama_2414	0.68	-0.8
2,902,170	-		Sama_2414	0.68	+1.7
2,902,171	+		Sama_2414	0.68	+0.0
2,902,171	+		Sama_2414	0.68	-0.3
2,902,172	-		Sama_2414	0.68	-0.1
2,902,172	-		Sama_2414	0.68	-0.2
2,902,172	-		Sama_2414	0.68	-1.5
2,902,198	+		Sama_2414	0.74	+2.1
2,902,198	+		Sama_2414	0.74	+0.1
2,902,215	+		Sama_2414	0.78	-0.8
2,902,215	+		Sama_2414	0.78	+0.2
2,902,215	+		Sama_2414	0.78	-0.8
2,902,215	+		Sama_2414	0.78	+0.6
2,902,216	-		Sama_2414	0.79	+0.2
2,902,267	+				-0.8
2,902,307	+				+0.1
2,902,307	+				+1.1
2,902,308	-				-2.3
2,902,318	-				-0.9
2,902,345	+				+0.2
2,902,345	+				-0.1
2,902,346	-				-0.7
2,902,346	-				-1.0
2,902,346	-				+0.5
2,902,346	-				+0.4
2,902,346	-				+0.7
2,902,346	-				-0.3
2,902,419	-				-2.0
2,902,509	+				+0.8
2,902,509	+				-0.5
2,902,510	-				-1.8
2,902,510	-				-1.2
2,902,564	-				-0.2
2,902,625	+				+0.2
2,902,672	-				-1.3
2,902,776	-		Sama_2415	0.11	-0.3
2,902,776	-		Sama_2415	0.11	-1.1
2,902,939	-		Sama_2415	0.16	-0.0
2,902,968	-		Sama_2415	0.17	+2.1
2,902,968	-		Sama_2415	0.17	-0.6
2,903,012	+		Sama_2415	0.18	+0.7
2,903,012	+		Sama_2415	0.18	+0.7
2,903,013	-		Sama_2415	0.18	+0.9
2,903,087	+		Sama_2415	0.21	+0.6
2,903,088	-		Sama_2415	0.21	-1.1
2,903,146	-		Sama_2415	0.22	-0.4
2,903,146	-		Sama_2415	0.22	+0.2
2,903,146	-		Sama_2415	0.22	-0.8
2,903,170	+		Sama_2415	0.23	+0.3
2,903,171	-		Sama_2415	0.23	+0.5
2,903,251	-		Sama_2415	0.26	-0.4
2,903,609	-		Sama_2415	0.37	-0.6
2,903,609	-		Sama_2415	0.37	+0.9
2,903,609	-		Sama_2415	0.37	-1.0
2,903,609	-		Sama_2415	0.37	+0.1
2,903,609	-		Sama_2415	0.37	+0.5
2,903,609	-		Sama_2415	0.37	+1.7
2,903,609	-		Sama_2415	0.37	-0.1
2,903,609	-		Sama_2415	0.37	-0.7
2,903,609	-		Sama_2415	0.37	+0.5
2,903,658	+		Sama_2415	0.38	+0.1
2,903,659	-		Sama_2415	0.38	-0.8
2,903,659	-		Sama_2415	0.38	-0.3
2,903,659	-		Sama_2415	0.38	+0.7
2,903,662	+		Sama_2415	0.38	+1.0
2,903,662	+		Sama_2415	0.38	+0.1
2,903,662	+		Sama_2415	0.38	-0.6
2,903,662	+		Sama_2415	0.38	-0.6
2,903,663	-		Sama_2415	0.38	-0.4
2,903,663	-		Sama_2415	0.38	-0.6
2,903,778	-		Sama_2415	0.42	+0.2
2,903,778	-		Sama_2415	0.42	+1.5
2,903,803	-		Sama_2415	0.43	-0.2
2,903,833	-		Sama_2415	0.44	-0.3
2,903,857	-		Sama_2415	0.44	+0.2
2,903,865	+		Sama_2415	0.44	+0.7
2,903,866	-		Sama_2415	0.45	+0.1
2,903,866	-		Sama_2415	0.45	-0.7
2,903,882	+		Sama_2415	0.45	+0.1
2,903,883	-		Sama_2415	0.45	-0.9
2,904,093	+		Sama_2415	0.51	+0.5
2,904,094	-		Sama_2415	0.52	-1.5
2,904,170	+		Sama_2415	0.54	+0.1
2,904,170	+		Sama_2415	0.54	+0.3
2,904,170	+		Sama_2415	0.54	-0.3
2,904,170	+		Sama_2415	0.54	-0.1
2,904,170	+		Sama_2415	0.54	+0.6
2,904,171	-		Sama_2415	0.54	+1.0
2,904,215	+		Sama_2415	0.55	-0.4
2,904,215	+		Sama_2415	0.55	-1.1
2,904,215	+		Sama_2415	0.55	+0.5
2,904,215	+		Sama_2415	0.55	-0.1
2,904,215	+		Sama_2415	0.55	-0.5
2,904,216	-		Sama_2415	0.55	-1.5
2,904,216	-		Sama_2415	0.55	+1.1
2,904,216	-		Sama_2415	0.55	+0.9
2,904,216	-		Sama_2415	0.55	-0.0
2,904,216	-		Sama_2415	0.55	+0.8
2,904,216	-		Sama_2415	0.55	+0.0
2,904,216	-		Sama_2415	0.55	+1.4
2,904,216	-		Sama_2415	0.55	+0.5
2,904,220	-		Sama_2415	0.55	-1.3
2,904,260	+		Sama_2415	0.57	+0.9
2,904,260	+		Sama_2415	0.57	+2.5
2,904,261	-		Sama_2415	0.57	-0.1
2,904,261	-		Sama_2415	0.57	-0.1
2,904,268	+		Sama_2415	0.57	+1.0
2,904,268	+		Sama_2415	0.57	-1.9
2,904,268	+		Sama_2415	0.57	-0.0
2,904,268	+		Sama_2415	0.57	-0.9
2,904,269	-		Sama_2415	0.57	+0.7
2,904,269	-		Sama_2415	0.57	+2.6
2,904,337	-		Sama_2415	0.59	-0.2
2,904,337	-		Sama_2415	0.59	+0.5
2,904,337	-		Sama_2415	0.59	-0.4
2,904,337	-		Sama_2415	0.59	-3.1
2,904,337	-		Sama_2415	0.59	-1.0
2,904,399	+		Sama_2415	0.61	+0.1
2,904,400	-		Sama_2415	0.61	-1.9
2,904,400	-		Sama_2415	0.61	+0.9
2,904,407	+		Sama_2415	0.61	-1.1
2,904,407	+		Sama_2415	0.61	+0.9
2,904,407	+		Sama_2415	0.61	-1.5
2,904,429	-		Sama_2415	0.62	+1.3
2,904,429	-		Sama_2415	0.62	+0.9
2,904,616	+		Sama_2415	0.68	+0.1
2,904,617	-		Sama_2415	0.68	+0.4
2,904,617	-		Sama_2415	0.68	-1.3
2,904,617	-		Sama_2415	0.68	+0.2
2,904,618	+		Sama_2415	0.68	+1.5
2,904,618	+		Sama_2415	0.68	+0.8
2,904,619	-		Sama_2415	0.68	-1.2
2,904,619	-		Sama_2415	0.68	-0.2
2,904,619	-		Sama_2415	0.68	-2.0
2,904,709	-		Sama_2415	0.70	+0.5
2,904,744	-		Sama_2415	0.71	-0.4
2,904,744	-		Sama_2415	0.71	-0.3
2,904,744	-		Sama_2415	0.71	+0.5
2,904,744	-		Sama_2415	0.71	+0.0
2,904,756	+		Sama_2415	0.72	+0.7
2,904,835	-		Sama_2415	0.74	-0.4
2,904,868	+		Sama_2415	0.75	+0.5
2,904,868	+		Sama_2415	0.75	+0.9
2,904,917	+		Sama_2415	0.77	+0.5
2,904,917	+		Sama_2415	0.77	+1.3
2,904,917	+		Sama_2415	0.77	+0.1
2,904,918	-		Sama_2415	0.77	+0.1
2,904,918	-		Sama_2415	0.77	-0.0
2,904,918	-		Sama_2415	0.77	-0.3
2,904,918	-		Sama_2415	0.77	-0.6
2,904,918	-		Sama_2415	0.77	+0.8
2,904,963	-		Sama_2415	0.78	+0.0
2,904,970	-		Sama_2415	0.78	+0.3
2,904,998	+		Sama_2415	0.79	+0.1
2,904,999	-		Sama_2415	0.79	+1.1
2,904,999	-		Sama_2415	0.79	+0.4
2,905,071	+		Sama_2415	0.82	-0.1
2,905,088	+		Sama_2415	0.82	+1.0
2,905,089	-		Sama_2415	0.82	-1.0
2,905,089	-		Sama_2415	0.82	+0.8
2,905,122	-		Sama_2415	0.83	+0.1
2,905,169	+		Sama_2415	0.85	-0.5
2,905,170	-		Sama_2415	0.85	-0.5
2,905,170	-		Sama_2415	0.85	+0.3
2,905,175	+		Sama_2415	0.85	+0.1
2,905,176	-		Sama_2415	0.85	+0.2
2,905,176	-		Sama_2415	0.85	+0.0
2,905,176	-		Sama_2415	0.85	+0.2
2,905,176	-		Sama_2415	0.85	-1.5
2,905,176	-		Sama_2415	0.85	+0.5
2,905,272	-		Sama_2415	0.88	-1.1
2,905,272	-		Sama_2415	0.88	-0.3
2,905,304	+		Sama_2415	0.89	-1.0
2,905,304	+		Sama_2415	0.89	+1.2
2,905,304	+		Sama_2415	0.89	-0.6
2,905,304	+		Sama_2415	0.89	+1.3
2,905,304	+		Sama_2415	0.89	+1.1
2,905,304	+		Sama_2415	0.89	+0.3
2,905,305	-		Sama_2415	0.89	-0.0
2,905,305	-		Sama_2415	0.89	+1.5
2,905,305	-		Sama_2415	0.89	+1.5
2,905,305	-		Sama_2415	0.89	-0.2
2,905,305	-		Sama_2415	0.89	+0.0
2,905,337	-		Sama_2415	0.90	-1.3
2,905,337	-		Sama_2415	0.90	+0.3
2,905,337	-		Sama_2415	0.90	-0.7
2,905,400	+				+0.7
2,905,400	+				+1.5
2,905,400	+				+0.2
2,905,400	+				+0.2
2,905,400	+				+2.1
2,905,400	+				+0.6
2,905,400	+				+0.6
2,905,400	+				+0.1
2,905,401	-				-2.1
2,905,401	-				+0.5
2,905,401	-				+0.5
2,905,401	-				+1.9
2,905,401	-				+1.0
2,905,401	-				-1.2
2,905,401	-				+0.5
2,905,401	-				-0.4
2,905,421	+				-0.0
2,905,422	-				+0.8
2,905,422	-				+0.6
2,905,528	+				+0.2
2,905,555	+				+1.1
2,905,555	+				+0.1
2,905,556	-				-0.6
2,905,563	+				-0.5
2,905,564	-				+0.1
2,905,564	-				+0.1
2,905,590	-				-0.3
2,905,593	-				-0.5
2,905,621	+				-0.2
2,905,621	+				+0.6
2,905,622	-				-0.0
2,905,622	-				+0.2
2,905,695	-				-0.2
2,905,747	+				+0.9
2,905,748	-				+0.5
2,905,748	-				-1.0
2,905,748	-				+0.5
2,905,779	-				+1.9
2,905,857	-				-2.1
2,905,999	-				-0.4
2,906,020	+				-0.4
2,906,020	+				-0.1
2,906,021	-				-0.0
2,906,021	-				-0.4
2,906,057	+				+0.8
2,906,057	+				+0.3
2,906,057	+				-0.3
2,906,058	-				+1.2
2,906,104	-		Sama_2416	0.12	+1.6
2,906,225	-		Sama_2416	0.18	-1.9
2,906,232	+		Sama_2416	0.19	+0.4
2,906,279	+		Sama_2416	0.21	-1.1
2,906,343	+		Sama_2416	0.24	-2.9
2,906,344	-		Sama_2416	0.24	-0.6
2,906,366	+		Sama_2416	0.26	-0.7
2,906,367	-		Sama_2416	0.26	-0.9
2,906,367	-		Sama_2416	0.26	-0.5
2,906,400	+		Sama_2416	0.27	+0.3
2,906,400	+		Sama_2416	0.27	+0.3
2,906,401	-		Sama_2416	0.28	+1.0
2,906,444	+		Sama_2416	0.30	-1.0
2,906,444	+		Sama_2416	0.30	+0.2
2,906,444	+		Sama_2416	0.30	+0.4
2,906,444	+		Sama_2416	0.30	-0.4
2,906,445	-		Sama_2416	0.30	+0.5
2,906,446	+		Sama_2416	0.30	-0.7
2,906,446	+		Sama_2416	0.30	-0.1
2,906,446	+		Sama_2416	0.30	+0.7
2,906,446	+		Sama_2416	0.30	-0.7
2,906,447	-		Sama_2416	0.30	-0.5
2,906,447	-		Sama_2416	0.30	+0.1
2,906,447	-		Sama_2416	0.30	+0.8
2,906,447	-		Sama_2416	0.30	+0.7
2,906,447	-		Sama_2416	0.30	-1.7
2,906,447	-		Sama_2416	0.30	-0.3
2,906,447	-		Sama_2416	0.30	+0.6
2,906,469	-		Sama_2416	0.31	+1.7
2,906,506	-		Sama_2416	0.33	+0.5
2,906,526	+		Sama_2416	0.34	+0.8
2,906,526	+		Sama_2416	0.34	+0.3
2,906,526	+		Sama_2416	0.34	-0.7
2,906,526	+		Sama_2416	0.34	-0.1
2,906,526	+		Sama_2416	0.34	-0.6
2,906,526	+		Sama_2416	0.34	-0.3
2,906,526	+		Sama_2416	0.34	+0.8
2,906,527	-		Sama_2416	0.34	+1.3
2,906,527	-		Sama_2416	0.34	+0.1
2,906,527	-		Sama_2416	0.34	-1.7
2,906,527	-		Sama_2416	0.34	-0.5
2,906,527	-		Sama_2416	0.34	-0.2
2,906,527	-		Sama_2416	0.34	-0.7
2,906,527	-		Sama_2416	0.34	-0.5
2,906,527	-		Sama_2416	0.34	-0.7
2,906,527	-		Sama_2416	0.34	+0.1
2,906,527	-		Sama_2416	0.34	+0.5
2,906,528	+		Sama_2416	0.34	-2.0
2,906,528	+		Sama_2416	0.34	+0.2
2,906,528	+		Sama_2416	0.34	-0.5
2,906,528	+		Sama_2416	0.34	-0.7
2,906,528	+		Sama_2416	0.34	-0.0
2,906,528	+		Sama_2416	0.34	+0.3
2,906,528	+		Sama_2416	0.34	+1.8
2,906,529	-		Sama_2416	0.34	+0.9
2,906,529	-		Sama_2416	0.34	-0.8
2,906,529	-		Sama_2416	0.34	-0.3
2,906,529	-		Sama_2416	0.34	+0.5
2,906,529	-		Sama_2416	0.34	-1.3
2,906,529	-		Sama_2416	0.34	-1.1
2,906,529	-		Sama_2416	0.34	-0.9
2,906,529	-		Sama_2416	0.34	-1.3
2,906,529	-		Sama_2416	0.34	+0.1
2,906,541	-		Sama_2416	0.35	-0.2
2,906,541	-		Sama_2416	0.35	+1.3
2,906,541	-		Sama_2416	0.35	-0.7
2,906,541	-		Sama_2416	0.35	-0.4
2,906,548	+		Sama_2416	0.35	-0.7
2,906,548	+		Sama_2416	0.35	-0.1
2,906,548	+		Sama_2416	0.35	-0.5
2,906,549	-		Sama_2416	0.35	-0.5
2,906,567	+		Sama_2416	0.36	-1.5
2,906,568	-		Sama_2416	0.36	+1.5
2,906,568	-		Sama_2416	0.36	-0.5
2,906,656	-		Sama_2416	0.41	-0.5
2,906,656	-		Sama_2416	0.41	+0.5