Experiment: defined media with 40 mM sodium acetate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3372 and Dsui_3373 are separated by 16 nucleotides Dsui_3373 and Dsui_3374 are separated by 20 nucleotides Dsui_3374 and Dsui_3375 are separated by 143 nucleotides Dsui_3375 and Dsui_3376 are separated by 180 nucleotides
Dsui_3372: Dsui_3372 - hypothetical protein, at 3,613,262 to 3,615,406
_3372
Dsui_3373: Dsui_3373 - Na+/phosphate symporter, at 3,615,423 to 3,617,114
_3373
Dsui_3374: Dsui_3374 - cyclic nucleotide-binding protein, at 3,617,135 to 3,617,500
_3374
Dsui_3375: Dsui_3375 - hypothetical protein, at 3,617,644 to 3,617,820
_3375
Dsui_3376: Dsui_3376 - aspartate/tyrosine/aromatic aminotransferase, at 3,618,001 to 3,619,167
_3376
Position (kb)
3615
3616
3617
3618 Strain fitness (log2 ratio)
-1
0
1
2 at 3614.438 kb on - strand, within Dsui_3372 at 3614.545 kb on + strand, within Dsui_3372 at 3614.717 kb on - strand, within Dsui_3372 at 3614.834 kb on - strand, within Dsui_3372 at 3614.889 kb on - strand, within Dsui_3372 at 3615.028 kb on - strand, within Dsui_3372 at 3615.029 kb on - strand at 3615.096 kb on - strand, within Dsui_3372 at 3615.120 kb on + strand, within Dsui_3372 at 3615.162 kb on + strand, within Dsui_3372 at 3615.288 kb on + strand at 3615.304 kb on + strand at 3615.379 kb on - strand at 3615.514 kb on + strand at 3615.573 kb on + strand at 3615.775 kb on + strand, within Dsui_3373 at 3615.807 kb on + strand, within Dsui_3373 at 3615.844 kb on + strand, within Dsui_3373 at 3616.024 kb on + strand, within Dsui_3373 at 3616.102 kb on + strand at 3616.241 kb on + strand, within Dsui_3373 at 3616.260 kb on + strand, within Dsui_3373 at 3616.327 kb on + strand, within Dsui_3373 at 3616.481 kb on + strand, within Dsui_3373 at 3616.568 kb on - strand, within Dsui_3373 at 3616.576 kb on + strand, within Dsui_3373 at 3616.584 kb on - strand, within Dsui_3373 at 3616.584 kb on - strand at 3616.603 kb on - strand at 3616.704 kb on + strand, within Dsui_3373 at 3616.716 kb on + strand, within Dsui_3373 at 3616.716 kb on + strand, within Dsui_3373 at 3616.745 kb on + strand, within Dsui_3373 at 3616.835 kb on - strand, within Dsui_3373 at 3616.949 kb on + strand at 3617.150 kb on - strand at 3617.208 kb on + strand, within Dsui_3374 at 3617.208 kb on + strand, within Dsui_3374 at 3617.247 kb on - strand at 3617.335 kb on + strand, within Dsui_3374 at 3617.354 kb on + strand, within Dsui_3374 at 3617.367 kb on + strand, within Dsui_3374 at 3617.428 kb on - strand at 3617.531 kb on + strand at 3617.769 kb on - strand, within Dsui_3375
Per-strain Table
Position Strand Gene LocusTag Fraction defined media with 40 mM sodium acetate remove 3,614,438 - Dsui_3372 0.55 +0.7 3,614,545 + Dsui_3372 0.60 -0.4 3,614,717 - Dsui_3372 0.68 -0.9 3,614,834 - Dsui_3372 0.73 +0.1 3,614,889 - Dsui_3372 0.76 +1.0 3,615,028 - Dsui_3372 0.82 -0.5 3,615,029 - -0.2 3,615,096 - Dsui_3372 0.86 +0.8 3,615,120 + Dsui_3372 0.87 +0.0 3,615,162 + Dsui_3372 0.89 +0.3 3,615,288 + +0.3 3,615,304 + +0.2 3,615,379 - +1.1 3,615,514 + +0.5 3,615,573 + +0.8 3,615,775 + Dsui_3373 0.21 +0.6 3,615,807 + Dsui_3373 0.23 +0.5 3,615,844 + Dsui_3373 0.25 +0.2 3,616,024 + Dsui_3373 0.36 +0.2 3,616,102 + +2.1 3,616,241 + Dsui_3373 0.48 +0.7 3,616,260 + Dsui_3373 0.49 +0.6 3,616,327 + Dsui_3373 0.53 -0.0 3,616,481 + Dsui_3373 0.63 +0.6 3,616,568 - Dsui_3373 0.68 +0.8 3,616,576 + Dsui_3373 0.68 +0.1 3,616,584 - Dsui_3373 0.69 +0.5 3,616,584 - +2.5 3,616,603 - +1.1 3,616,704 + Dsui_3373 0.76 +0.1 3,616,716 + Dsui_3373 0.76 +0.0 3,616,716 + Dsui_3373 0.76 +0.1 3,616,745 + Dsui_3373 0.78 -0.2 3,616,835 - Dsui_3373 0.83 +0.9 3,616,949 + +0.1 3,617,150 - +0.3 3,617,208 + Dsui_3374 0.20 +0.5 3,617,208 + Dsui_3374 0.20 +0.5 3,617,247 - +0.5 3,617,335 + Dsui_3374 0.55 -0.9 3,617,354 + Dsui_3374 0.60 +0.4 3,617,367 + Dsui_3374 0.63 -0.0 3,617,428 - +0.5 3,617,531 + +0.7 3,617,769 - Dsui_3375 0.71 +0.2
Or see this region's nucleotide sequence