Experiment: defined media with 40 mM sodium acetate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2766 and Dsui_2767 are separated by 67 nucleotides Dsui_2767 and Dsui_2768 are separated by 109 nucleotides Dsui_2768 and Dsui_2769 are separated by 289 nucleotides
Dsui_2766: Dsui_2766 - putative homoserine kinase type II (protein kinase fold), at 2,924,302 to 2,925,309
_2766
Dsui_2767: Dsui_2767 - glutaredoxin-like protein, at 2,925,377 to 2,925,763
_2767
Dsui_2768: Dsui_2768 - uncharacterized protein involved in outer membrane biogenesis, at 2,925,873 to 2,926,982
_2768
Dsui_2769: Dsui_2769 - large extracellular alpha-helical protein, at 2,927,272 to 2,932,953
_2769
Position (kb)
2925
2926
2927 Strain fitness (log2 ratio)
-1
0
1
2 at 2924.944 kb on + strand, within Dsui_2766 at 2925.008 kb on + strand, within Dsui_2766 at 2925.107 kb on + strand, within Dsui_2766 at 2925.210 kb on + strand at 2925.233 kb on + strand at 2925.290 kb on + strand at 2925.290 kb on + strand at 2925.290 kb on + strand at 2925.305 kb on + strand at 2925.313 kb on - strand at 2925.362 kb on + strand at 2925.370 kb on - strand at 2925.475 kb on + strand at 2925.503 kb on + strand, within Dsui_2767 at 2925.565 kb on + strand, within Dsui_2767 at 2925.565 kb on + strand, within Dsui_2767 at 2925.575 kb on + strand, within Dsui_2767 at 2925.575 kb on + strand, within Dsui_2767 at 2925.583 kb on - strand at 2925.916 kb on + strand at 2925.918 kb on - strand at 2925.990 kb on + strand, within Dsui_2768 at 2926.030 kb on + strand, within Dsui_2768 at 2926.097 kb on + strand, within Dsui_2768 at 2926.271 kb on - strand at 2926.311 kb on + strand, within Dsui_2768 at 2926.385 kb on + strand, within Dsui_2768 at 2926.393 kb on - strand, within Dsui_2768 at 2926.451 kb on - strand at 2926.496 kb on + strand at 2926.532 kb on + strand, within Dsui_2768 at 2926.532 kb on + strand at 2926.540 kb on - strand at 2926.655 kb on + strand, within Dsui_2768 at 2926.801 kb on + strand, within Dsui_2768 at 2926.902 kb on + strand at 2927.081 kb on - strand at 2927.363 kb on - strand at 2927.429 kb on - strand at 2927.519 kb on + strand at 2927.601 kb on - strand at 2927.674 kb on + strand at 2927.753 kb on + strand at 2927.872 kb on + strand at 2927.973 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction defined media with 40 mM sodium acetate remove 2,924,944 + Dsui_2766 0.64 -0.0 2,925,008 + Dsui_2766 0.70 -0.9 2,925,107 + Dsui_2766 0.80 +1.0 2,925,210 + -0.9 2,925,233 + -0.5 2,925,290 + -0.2 2,925,290 + +1.5 2,925,290 + -0.2 2,925,305 + +0.7 2,925,313 - -0.7 2,925,362 + +0.3 2,925,370 - +0.3 2,925,475 + -0.5 2,925,503 + Dsui_2767 0.33 +0.3 2,925,565 + Dsui_2767 0.49 +0.8 2,925,565 + Dsui_2767 0.49 -0.5 2,925,575 + Dsui_2767 0.51 +0.6 2,925,575 + Dsui_2767 0.51 -0.1 2,925,583 - -0.1 2,925,916 + +0.5 2,925,918 - +1.3 2,925,990 + Dsui_2768 0.11 +0.7 2,926,030 + Dsui_2768 0.14 +1.1 2,926,097 + Dsui_2768 0.20 +0.0 2,926,271 - -0.3 2,926,311 + Dsui_2768 0.39 +0.5 2,926,385 + Dsui_2768 0.46 -0.4 2,926,393 - Dsui_2768 0.47 -0.0 2,926,451 - +1.0 2,926,496 + -0.9 2,926,532 + Dsui_2768 0.59 +0.9 2,926,532 + -0.7 2,926,540 - -0.1 2,926,655 + Dsui_2768 0.70 -0.1 2,926,801 + Dsui_2768 0.84 +1.9 2,926,902 + +0.1 2,927,081 - +2.3 2,927,363 - +1.3 2,927,429 - -0.3 2,927,519 + +1.3 2,927,601 - +0.9 2,927,674 + +1.3 2,927,753 + +1.8 2,927,872 + +1.7 2,927,973 + +1.3
Or see this region's nucleotide sequence