Experiment: defined media with 40 mM sodium acetate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2752 and Dsui_2753 are separated by 5 nucleotides Dsui_2753 and Dsui_2754 are separated by 262 nucleotides Dsui_2754 and Dsui_2755 are separated by 110 nucleotides Dsui_2755 and Dsui_2756 are separated by 89 nucleotides
Dsui_2752: Dsui_2752 - ABC-type multidrug transport system, ATPase and permease component, at 2,910,746 to 2,912,953
_2752
Dsui_2753: Dsui_2753 - protein of unknown function (DUF1854), at 2,912,959 to 2,913,429
_2753
Dsui_2754: Dsui_2754 - collagenase-like protease, at 2,913,692 to 2,915,578
_2754
Dsui_2755: Dsui_2755 - hypothetical protein, at 2,915,689 to 2,915,889
_2755
Dsui_2756: Dsui_2756 - hypothetical protein, at 2,915,979 to 2,916,593
_2756
Position (kb)
2913
2914
2915
2916 Strain fitness (log2 ratio)
-1
0
1
2
3 at 2912.890 kb on + strand at 2912.890 kb on + strand at 2913.583 kb on + strand at 2913.583 kb on + strand at 2913.617 kb on - strand at 2913.622 kb on - strand at 2913.644 kb on + strand at 2913.662 kb on - strand at 2914.038 kb on + strand, within Dsui_2754 at 2914.128 kb on + strand, within Dsui_2754 at 2914.200 kb on + strand, within Dsui_2754 at 2914.395 kb on - strand, within Dsui_2754 at 2914.477 kb on + strand, within Dsui_2754 at 2914.488 kb on + strand, within Dsui_2754 at 2914.548 kb on + strand, within Dsui_2754 at 2914.598 kb on - strand at 2914.610 kb on - strand, within Dsui_2754 at 2914.735 kb on + strand, within Dsui_2754 at 2914.795 kb on + strand, within Dsui_2754 at 2914.810 kb on - strand, within Dsui_2754 at 2914.843 kb on - strand, within Dsui_2754 at 2914.930 kb on - strand at 2914.962 kb on + strand, within Dsui_2754 at 2914.994 kb on - strand, within Dsui_2754 at 2915.022 kb on - strand, within Dsui_2754 at 2915.106 kb on + strand, within Dsui_2754 at 2915.296 kb on - strand at 2915.296 kb on - strand, within Dsui_2754 at 2915.423 kb on - strand at 2915.423 kb on - strand at 2915.423 kb on - strand at 2915.423 kb on - strand at 2915.423 kb on - strand at 2915.467 kb on - strand at 2915.479 kb on - strand at 2915.571 kb on - strand at 2915.639 kb on - strand at 2915.963 kb on - strand at 2915.992 kb on + strand at 2916.035 kb on - strand at 2916.157 kb on + strand, within Dsui_2756 at 2916.478 kb on + strand, within Dsui_2756 at 2916.505 kb on + strand, within Dsui_2756
Per-strain Table
Position Strand Gene LocusTag Fraction defined media with 40 mM sodium acetate remove 2,912,890 + -0.1 2,912,890 + +0.6 2,913,583 + +0.6 2,913,583 + +0.2 2,913,617 - -0.8 2,913,622 - -0.3 2,913,644 + +0.7 2,913,662 - +1.3 2,914,038 + Dsui_2754 0.18 +0.5 2,914,128 + Dsui_2754 0.23 +1.0 2,914,200 + Dsui_2754 0.27 +0.7 2,914,395 - Dsui_2754 0.37 +0.2 2,914,477 + Dsui_2754 0.42 +2.6 2,914,488 + Dsui_2754 0.42 +1.1 2,914,548 + Dsui_2754 0.45 +0.2 2,914,598 - +1.3 2,914,610 - Dsui_2754 0.49 +0.1 2,914,735 + Dsui_2754 0.55 +0.2 2,914,795 + Dsui_2754 0.58 +0.8 2,914,810 - Dsui_2754 0.59 +0.6 2,914,843 - Dsui_2754 0.61 +0.9 2,914,930 - +3.3 2,914,962 + Dsui_2754 0.67 +1.0 2,914,994 - Dsui_2754 0.69 -1.0 2,915,022 - Dsui_2754 0.70 -0.6 2,915,106 + Dsui_2754 0.75 -0.3 2,915,296 - +2.7 2,915,296 - Dsui_2754 0.85 +0.3 2,915,423 - +0.7 2,915,423 - +1.0 2,915,423 - -0.5 2,915,423 - +0.3 2,915,423 - -0.3 2,915,467 - -0.4 2,915,479 - -0.5 2,915,571 - -0.4 2,915,639 - +0.4 2,915,963 - +0.3 2,915,992 + +0.2 2,916,035 - -1.0 2,916,157 + Dsui_2756 0.29 -1.3 2,916,478 + Dsui_2756 0.81 +1.5 2,916,505 + Dsui_2756 0.86 +0.3
Or see this region's nucleotide sequence