Experiment: defined media with 40 mM sodium acetate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0615 and Dsui_0616 are separated by 14 nucleotides Dsui_0616 and Dsui_0617 are separated by 3 nucleotides
Dsui_0615: Dsui_0615 - ABC-type transport system, involved in lipoprotein release, permease component, at 609,864 to 611,000
_0615
Dsui_0616: Dsui_0616 - ABC-type antimicrobial peptide transport system, ATPase component, at 611,015 to 611,689
_0616
Dsui_0617: Dsui_0617 - hypothetical protein, at 611,693 to 612,697
_0617
Position (kb) 611
612 Strain fitness (log2 ratio) -1
0
1
2
3 at 610.053 kb on - strand, within Dsui_0615 at 610.081 kb on + strand, within Dsui_0615 at 610.166 kb on + strand, within Dsui_0615 at 610.181 kb on + strand, within Dsui_0615 at 610.191 kb on + strand, within Dsui_0615 at 610.200 kb on - strand, within Dsui_0615 at 610.328 kb on - strand, within Dsui_0615 at 610.375 kb on - strand, within Dsui_0615 at 610.552 kb on - strand, within Dsui_0615 at 610.858 kb on - strand, within Dsui_0615 at 611.088 kb on - strand at 611.206 kb on + strand, within Dsui_0616 at 611.206 kb on + strand, within Dsui_0616 at 611.214 kb on + strand, within Dsui_0616 at 611.315 kb on + strand, within Dsui_0616 at 611.508 kb on + strand, within Dsui_0616 at 611.618 kb on - strand, within Dsui_0616 at 612.047 kb on - strand, within Dsui_0617 at 612.422 kb on - strand, within Dsui_0617 at 612.578 kb on - strand at 612.603 kb on + strand at 612.675 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction defined media with 40 mM sodium acetate remove 610,053 - Dsui_0615 0.17 +0.6 610,081 + Dsui_0615 0.19 -0.2 610,166 + Dsui_0615 0.27 +0.5 610,181 + Dsui_0615 0.28 -0.1 610,191 + Dsui_0615 0.29 +0.2 610,200 - Dsui_0615 0.30 +0.6 610,328 - Dsui_0615 0.41 +0.8 610,375 - Dsui_0615 0.45 +0.3 610,552 - Dsui_0615 0.61 -0.6 610,858 - Dsui_0615 0.87 +0.1 611,088 - +3.1 611,206 + Dsui_0616 0.28 -0.1 611,206 + Dsui_0616 0.28 -1.4 611,214 + Dsui_0616 0.29 -0.8 611,315 + Dsui_0616 0.44 -0.6 611,508 + Dsui_0616 0.73 -1.6 611,618 - Dsui_0616 0.89 -1.2 612,047 - Dsui_0617 0.35 +0.6 612,422 - Dsui_0617 0.73 -0.0 612,578 - +1.1 612,603 + +1.1 612,675 + +0.6
Or see this region's nucleotide sequence