Experiment: defined media with 40 mM sodium acetate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0420 and Dsui_0421 are separated by 58 nucleotides Dsui_0421 and Dsui_0422 are separated by 330 nucleotides
Dsui_0420: Dsui_0420 - transcriptional regulator with HTH domain and aminotransferase domain, at 421,215 to 422,624
_0420
Dsui_0421: Dsui_0421 - carbonic anhydrase, at 422,683 to 424,119
_0421
Dsui_0422: Dsui_0422 - thiamine biosynthesis protein ThiC, at 424,450 to 426,366
_0422
Position (kb) 422
423
424
425 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 421.729 kb on - strand at 421.777 kb on + strand, within Dsui_0420 at 421.851 kb on - strand, within Dsui_0420 at 421.876 kb on + strand, within Dsui_0420 at 421.958 kb on - strand at 421.958 kb on - strand, within Dsui_0420 at 422.117 kb on + strand, within Dsui_0420 at 422.122 kb on + strand, within Dsui_0420 at 422.130 kb on - strand, within Dsui_0420 at 422.182 kb on + strand, within Dsui_0420 at 422.234 kb on - strand, within Dsui_0420 at 422.615 kb on - strand at 422.616 kb on - strand at 422.616 kb on - strand at 422.779 kb on + strand at 422.963 kb on - strand, within Dsui_0421 at 422.964 kb on - strand at 423.122 kb on - strand, within Dsui_0421 at 423.331 kb on + strand at 423.369 kb on + strand, within Dsui_0421 at 423.378 kb on + strand, within Dsui_0421 at 423.379 kb on + strand, within Dsui_0421 at 423.463 kb on + strand at 423.625 kb on - strand, within Dsui_0421 at 423.647 kb on + strand, within Dsui_0421 at 423.769 kb on - strand, within Dsui_0421 at 423.857 kb on + strand, within Dsui_0421 at 423.897 kb on - strand, within Dsui_0421 at 423.935 kb on + strand, within Dsui_0421 at 423.985 kb on - strand at 424.115 kb on + strand at 424.115 kb on + strand at 424.123 kb on - strand at 424.140 kb on + strand at 424.140 kb on + strand at 424.151 kb on + strand at 424.151 kb on + strand at 424.159 kb on - strand at 424.159 kb on - strand at 424.159 kb on - strand at 424.181 kb on + strand at 424.192 kb on + strand at 424.242 kb on + strand at 424.242 kb on + strand at 424.250 kb on - strand at 424.369 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction defined media with 40 mM sodium acetate remove 421,729 - +1.8 421,777 + Dsui_0420 0.40 +0.6 421,851 - Dsui_0420 0.45 +1.2 421,876 + Dsui_0420 0.47 -0.1 421,958 - +0.1 421,958 - Dsui_0420 0.53 -0.0 422,117 + Dsui_0420 0.64 -0.0 422,122 + Dsui_0420 0.64 -0.1 422,130 - Dsui_0420 0.65 +0.5 422,182 + Dsui_0420 0.69 +0.1 422,234 - Dsui_0420 0.72 -2.9 422,615 - -0.1 422,616 - +3.7 422,616 - +1.1 422,779 + +0.3 422,963 - Dsui_0421 0.19 +0.8 422,964 - +0.9 423,122 - Dsui_0421 0.31 +0.1 423,331 + +0.5 423,369 + Dsui_0421 0.48 +0.7 423,378 + Dsui_0421 0.48 +1.9 423,379 + Dsui_0421 0.48 -0.4 423,463 + +0.5 423,625 - Dsui_0421 0.66 +1.0 423,647 + Dsui_0421 0.67 +1.5 423,769 - Dsui_0421 0.76 -0.4 423,857 + Dsui_0421 0.82 +0.1 423,897 - Dsui_0421 0.84 +0.5 423,935 + Dsui_0421 0.87 +0.9 423,985 - -0.3 424,115 + -0.2 424,115 + +0.9 424,123 - +0.2 424,140 + +0.1 424,140 + -1.4 424,151 + -0.1 424,151 + +1.1 424,159 - +1.4 424,159 - -0.9 424,159 - +0.5 424,181 + +0.5 424,192 + +1.1 424,242 + +1.1 424,242 + +0.8 424,250 - +1.5 424,369 + -0.7
Or see this region's nucleotide sequence