Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_3043
Experiment: MoYLS4 with Carbenicillin 0.0468 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Carbenicillin 0.0468 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,839,067 | - | DvMF_3042 | 0.13 | -0.3 | |
3,839,307 | - | DvMF_3042 | 0.38 | -0.9 | |
3,839,601 | + | DvMF_3042 | 0.68 | -0.2 | |
3,839,609 | - | DvMF_3042 | 0.69 | -0.4 | |
3,839,691 | - | DvMF_3042 | 0.78 | -0.3 | |
3,839,765 | - | DvMF_3042 | 0.85 | -0.5 | |
3,840,090 | + | +0.9 | |||
3,840,129 | + | DvMF_3043 | 0.13 | -0.0 | |
3,840,129 | + | DvMF_3043 | 0.13 | +0.8 | |
3,840,137 | - | DvMF_3043 | 0.14 | -0.2 | |
3,840,147 | - | DvMF_3043 | 0.15 | -0.1 | |
3,840,172 | - | DvMF_3043 | 0.17 | -0.4 | |
3,840,436 | - | DvMF_3043 | 0.45 | -0.2 | |
3,840,673 | + | DvMF_3043 | 0.69 | -0.5 | |
3,840,698 | - | DvMF_3043 | 0.72 | -0.4 | |
3,841,121 | - | -0.4 | |||
3,841,217 | - | -1.0 | |||
3,841,217 | - | -2.0 | |||
3,841,462 | + | DvMF_3044 | 0.16 | -2.6 | |
3,841,527 | - | DvMF_3044 | 0.22 | -2.9 | |
3,841,626 | + | DvMF_3044 | 0.30 | -1.9 | |
3,841,722 | + | DvMF_3044 | 0.37 | -3.8 |
Or see this region's nucleotide sequence