Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2819
Experiment: MoYLS4 with Carbenicillin 0.0468 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Carbenicillin 0.0468 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,563,323 | - | -0.2 | |||
3,563,330 | + | -0.2 | |||
3,563,338 | - | -0.4 | |||
3,563,501 | + | DvMF_2818 | 0.25 | -0.6 | |
3,563,806 | - | DvMF_2818 | 0.73 | -0.2 | |
3,563,852 | - | DvMF_2818 | 0.80 | -0.0 | |
3,564,249 | - | -0.1 | |||
3,564,267 | + | -0.9 | |||
3,564,267 | + | -0.3 | |||
3,564,275 | - | +0.1 | |||
3,564,275 | - | -0.2 | |||
3,564,296 | - | -0.4 | |||
3,564,348 | + | -0.4 | |||
3,564,383 | + | -0.0 | |||
3,564,386 | - | -0.3 | |||
3,564,484 | - | DvMF_2819 | 0.16 | -0.1 | |
3,564,553 | - | DvMF_2819 | 0.22 | -0.5 | |
3,564,553 | - | DvMF_2819 | 0.22 | -0.2 | |
3,564,707 | + | DvMF_2819 | 0.36 | -0.7 | |
3,564,789 | - | DvMF_2819 | 0.43 | -0.5 | |
3,564,805 | + | DvMF_2819 | 0.44 | -0.4 | |
3,564,853 | - | DvMF_2819 | 0.49 | -0.1 | |
3,564,869 | - | DvMF_2819 | 0.50 | +0.2 | |
3,565,069 | - | DvMF_2819 | 0.68 | -0.1 | |
3,565,177 | + | DvMF_2819 | 0.78 | +0.2 | |
3,565,212 | - | DvMF_2819 | 0.81 | -1.1 |
Or see this region's nucleotide sequence