Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2168
Experiment: MoYLS4 with Carbenicillin 0.0468 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Carbenicillin 0.0468 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,703,429 | + | -0.2 | |||
2,703,431 | + | -0.4 | |||
2,703,746 | + | DvMF_2167 | 0.24 | +0.0 | |
2,703,870 | - | DvMF_2167 | 0.49 | +1.0 | |
2,703,917 | + | DvMF_2167 | 0.59 | +1.0 | |
2,704,013 | - | DvMF_2167 | 0.79 | +0.4 | |
2,704,177 | - | -0.3 | |||
2,704,191 | + | -0.2 | |||
2,704,356 | - | -0.3 | |||
2,704,400 | + | DvMF_2168 | 0.19 | -0.3 | |
2,704,428 | + | DvMF_2168 | 0.25 | -0.9 | |
2,704,433 | + | DvMF_2168 | 0.26 | -0.8 | |
2,704,433 | + | DvMF_2168 | 0.26 | -0.4 | |
2,704,530 | + | DvMF_2168 | 0.49 | -0.3 | |
2,704,546 | - | DvMF_2168 | 0.53 | -0.4 | |
2,704,750 | + | -0.3 | |||
2,705,237 | - | -0.7 | |||
2,705,381 | + | -0.1 | |||
2,705,389 | - | -0.2 | |||
2,705,522 | - | DvMF_2169 | 0.16 | -0.6 | |
2,705,533 | - | DvMF_2169 | 0.17 | -0.4 | |
2,705,744 | + | DvMF_2169 | 0.28 | -0.3 |
Or see this region's nucleotide sequence