Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1927
Experiment: MoYLS4 with Carbenicillin 0.0468 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Carbenicillin 0.0468 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,374,973 | - | -0.6 | |||
2,375,478 | + | -0.1 | |||
2,375,491 | - | +0.1 | |||
2,375,570 | - | DvMF_1926 | 0.21 | -0.5 | |
2,375,594 | - | DvMF_1926 | 0.28 | -0.4 | |
2,375,823 | + | -0.3 | |||
2,375,895 | + | -0.2 | |||
2,375,925 | + | -0.2 | |||
2,376,025 | - | -0.2 | |||
2,376,360 | - | DvMF_1927 | 0.23 | -0.3 | |
2,376,380 | + | DvMF_1927 | 0.24 | -0.3 | |
2,376,424 | - | DvMF_1927 | 0.27 | -0.3 | |
2,376,456 | + | DvMF_1927 | 0.28 | -0.5 | |
2,376,539 | - | DvMF_1927 | 0.32 | -0.3 | |
2,376,630 | + | DvMF_1927 | 0.37 | -0.3 | |
2,376,902 | - | DvMF_1927 | 0.51 | -0.4 | |
2,377,018 | + | DvMF_1927 | 0.57 | -0.4 | |
2,377,224 | + | DvMF_1927 | 0.68 | -1.9 | |
2,377,338 | - | DvMF_1927 | 0.74 | -0.6 | |
2,377,481 | - | DvMF_1927 | 0.81 | -1.0 | |
2,377,539 | - | DvMF_1927 | 0.84 | +0.0 | |
2,377,936 | + | -1.2 | |||
2,378,059 | + | -0.8 | |||
2,378,537 | + | DvMF_1928 | 0.33 | -2.5 | |
2,378,620 | - | DvMF_1928 | 0.39 | -1.2 |
Or see this region's nucleotide sequence