Experiment: MoYLS4 with Carbenicillin 0.0468 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1483 and DvMF_1484 are separated by 397 nucleotides DvMF_1484 and DvMF_1485 are separated by 303 nucleotides
DvMF_1483: DvMF_1483 - inner-membrane translocator (RefSeq), at 1,817,023 to 1,817,910
_1483
DvMF_1484: DvMF_1484 - Nitrate reductase (RefSeq), at 1,818,308 to 1,820,527
_1484
DvMF_1485: DvMF_1485 - glutaminyl-tRNA synthetase (RefSeq), at 1,820,831 to 1,822,540
_1485
Position (kb)
1818
1819
1820
1821 Strain fitness (log2 ratio)
-2
-1
0
1 at 1817.465 kb on + strand, within DvMF_1483 at 1817.535 kb on + strand, within DvMF_1483 at 1817.551 kb on + strand, within DvMF_1483 at 1817.662 kb on - strand, within DvMF_1483 at 1817.838 kb on - strand at 1817.848 kb on - strand at 1817.878 kb on - strand at 1817.953 kb on + strand at 1818.139 kb on + strand at 1818.185 kb on - strand at 1818.228 kb on - strand at 1818.511 kb on - strand at 1818.530 kb on + strand, within DvMF_1484 at 1818.582 kb on - strand, within DvMF_1484 at 1818.652 kb on - strand, within DvMF_1484 at 1818.822 kb on - strand, within DvMF_1484 at 1819.034 kb on - strand, within DvMF_1484 at 1819.195 kb on - strand, within DvMF_1484 at 1819.242 kb on + strand, within DvMF_1484 at 1819.274 kb on + strand, within DvMF_1484 at 1819.324 kb on + strand, within DvMF_1484 at 1819.430 kb on + strand, within DvMF_1484 at 1819.574 kb on - strand, within DvMF_1484 at 1819.581 kb on + strand, within DvMF_1484 at 1819.637 kb on + strand, within DvMF_1484 at 1819.716 kb on + strand, within DvMF_1484 at 1819.758 kb on - strand, within DvMF_1484 at 1819.870 kb on - strand, within DvMF_1484 at 1819.897 kb on - strand, within DvMF_1484 at 1819.990 kb on + strand, within DvMF_1484 at 1820.021 kb on - strand, within DvMF_1484 at 1820.123 kb on - strand, within DvMF_1484 at 1820.150 kb on + strand, within DvMF_1484 at 1820.158 kb on - strand, within DvMF_1484 at 1820.247 kb on + strand, within DvMF_1484 at 1820.247 kb on + strand, within DvMF_1484 at 1820.449 kb on + strand at 1820.586 kb on - strand at 1820.703 kb on - strand at 1820.747 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Carbenicillin 0.0468 mg/ml remove 1,817,465 + DvMF_1483 0.50 -0.6 1,817,535 + DvMF_1483 0.58 -0.5 1,817,551 + DvMF_1483 0.59 -0.7 1,817,662 - DvMF_1483 0.72 -0.5 1,817,838 - +0.3 1,817,848 - -0.3 1,817,878 - -0.1 1,817,953 + -0.4 1,818,139 + -0.1 1,818,185 - +0.1 1,818,228 - -0.4 1,818,511 - -0.0 1,818,530 + DvMF_1484 0.10 -0.3 1,818,582 - DvMF_1484 0.12 -0.5 1,818,652 - DvMF_1484 0.15 -0.4 1,818,822 - DvMF_1484 0.23 -0.3 1,819,034 - DvMF_1484 0.33 -0.0 1,819,195 - DvMF_1484 0.40 -0.5 1,819,242 + DvMF_1484 0.42 -0.3 1,819,274 + DvMF_1484 0.44 -0.5 1,819,324 + DvMF_1484 0.46 -0.1 1,819,430 + DvMF_1484 0.51 -1.1 1,819,574 - DvMF_1484 0.57 -1.0 1,819,581 + DvMF_1484 0.57 -0.5 1,819,637 + DvMF_1484 0.60 -0.5 1,819,716 + DvMF_1484 0.63 +0.1 1,819,758 - DvMF_1484 0.65 -0.3 1,819,870 - DvMF_1484 0.70 -0.2 1,819,897 - DvMF_1484 0.72 -0.4 1,819,990 + DvMF_1484 0.76 +0.0 1,820,021 - DvMF_1484 0.77 -1.0 1,820,123 - DvMF_1484 0.82 -0.8 1,820,150 + DvMF_1484 0.83 -0.0 1,820,158 - DvMF_1484 0.83 -0.3 1,820,247 + DvMF_1484 0.87 -0.3 1,820,247 + DvMF_1484 0.87 -1.9 1,820,449 + -0.2 1,820,586 - +0.0 1,820,703 - -0.4 1,820,747 + -0.0
Or see this region's nucleotide sequence