Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1306
Experiment: MoYLS4 with Carbenicillin 0.0468 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Carbenicillin 0.0468 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,594,901 | + | DvMF_1305 | 0.42 | +0.4 | |
1,594,907 | + | DvMF_1305 | 0.43 | -0.3 | |
1,594,956 | - | DvMF_1305 | 0.46 | -0.0 | |
1,594,989 | - | DvMF_1305 | 0.48 | +0.6 | |
1,595,703 | - | +0.1 | |||
1,595,894 | - | DvMF_1306 | 0.24 | +0.2 | |
1,595,940 | - | DvMF_1306 | 0.34 | +0.1 | |
1,595,940 | - | DvMF_1306 | 0.34 | -0.0 | |
1,595,940 | - | DvMF_1306 | 0.34 | +0.0 | |
1,596,114 | + | DvMF_1306 | 0.72 | -0.2 | |
1,596,223 | - | -0.6 | |||
1,596,232 | + | -0.2 | |||
1,596,385 | - | -0.1 | |||
1,596,598 | - | DvMF_1307 | 0.40 | +0.2 | |
1,596,755 | - | +0.4 | |||
1,596,870 | - | DvMF_1308 | 0.23 | -0.2 | |
1,596,945 | + | DvMF_1308 | 0.33 | +0.2 | |
1,596,953 | - | DvMF_1308 | 0.34 | +0.0 | |
1,597,088 | - | DvMF_1308 | 0.52 | +0.1 | |
1,597,156 | - | DvMF_1308 | 0.61 | -0.2 |
Or see this region's nucleotide sequence