Experiment: rich media
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3455 and Dsui_3456 are separated by 188 nucleotides Dsui_3456 and Dsui_3457 are separated by 74 nucleotides Dsui_3457 and Dsui_3458 are separated by 308 nucleotides
Dsui_3455: Dsui_3455 - HD-GYP domain-containing protein, at 3,715,420 to 3,718,395
_3455
Dsui_3456: Dsui_3456 - hypothetical protein, at 3,718,584 to 3,718,961
_3456
Dsui_3457: Dsui_3457 - K+ transporter, at 3,719,036 to 3,720,919
_3457
Dsui_3458: Dsui_3458 - septum site-determining protein MinC, at 3,721,228 to 3,722,064
_3458
Position (kb)
3719
3720
3721 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3718.144 kb on + strand at 3718.240 kb on + strand at 3718.248 kb on - strand at 3718.318 kb on + strand at 3718.319 kb on - strand at 3718.351 kb on - strand at 3718.351 kb on - strand at 3718.351 kb on - strand at 3718.433 kb on + strand at 3718.433 kb on + strand at 3718.440 kb on + strand at 3718.563 kb on - strand at 3718.718 kb on + strand, within Dsui_3456 at 3718.810 kb on + strand, within Dsui_3456 at 3718.810 kb on + strand, within Dsui_3456 at 3718.830 kb on - strand, within Dsui_3456 at 3718.867 kb on + strand, within Dsui_3456 at 3719.033 kb on + strand at 3719.052 kb on - strand at 3719.223 kb on - strand at 3719.555 kb on - strand, within Dsui_3457 at 3719.779 kb on - strand, within Dsui_3457 at 3720.235 kb on - strand, within Dsui_3457 at 3721.072 kb on + strand at 3721.173 kb on + strand at 3721.181 kb on - strand at 3721.233 kb on - strand at 3721.502 kb on - strand, within Dsui_3458 at 3721.636 kb on + strand, within Dsui_3458 at 3721.770 kb on + strand, within Dsui_3458 at 3721.827 kb on + strand, within Dsui_3458 at 3721.874 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction rich media remove 3,718,144 + -0.4 3,718,240 + +0.1 3,718,248 - +0.9 3,718,318 + -0.6 3,718,319 - +1.0 3,718,351 - +0.0 3,718,351 - -2.5 3,718,351 - +0.1 3,718,433 + -0.7 3,718,433 + -0.4 3,718,440 + -1.6 3,718,563 - +0.1 3,718,718 + Dsui_3456 0.35 -0.4 3,718,810 + Dsui_3456 0.60 +0.6 3,718,810 + Dsui_3456 0.60 -0.0 3,718,830 - Dsui_3456 0.65 -0.9 3,718,867 + Dsui_3456 0.75 +0.0 3,719,033 + -0.1 3,719,052 - -0.1 3,719,223 - +0.1 3,719,555 - Dsui_3457 0.28 -1.1 3,719,779 - Dsui_3457 0.39 +0.3 3,720,235 - Dsui_3457 0.64 -1.1 3,721,072 + +0.9 3,721,173 + +1.9 3,721,181 - -0.3 3,721,233 - -0.8 3,721,502 - Dsui_3458 0.33 +0.9 3,721,636 + Dsui_3458 0.49 -0.7 3,721,770 + Dsui_3458 0.65 -0.1 3,721,827 + Dsui_3458 0.72 +0.8 3,721,874 - +0.9
Or see this region's nucleotide sequence