Strain Fitness in Dechlorosoma suillum PS around Dsui_3457

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_3455 and Dsui_3456 are separated by 188 nucleotidesDsui_3456 and Dsui_3457 are separated by 74 nucleotidesDsui_3457 and Dsui_3458 are separated by 308 nucleotides Dsui_3455: Dsui_3455 - HD-GYP domain-containing protein, at 3,715,420 to 3,718,395 _3455 Dsui_3456: Dsui_3456 - hypothetical protein, at 3,718,584 to 3,718,961 _3456 Dsui_3457: Dsui_3457 - K+ transporter, at 3,719,036 to 3,720,919 _3457 Dsui_3458: Dsui_3458 - septum site-determining protein MinC, at 3,721,228 to 3,722,064 _3458 Position (kb) 3719 3720 3721Strain fitness (log2 ratio) -2 -1 0 1 2at 3718.144 kb on + strandat 3718.240 kb on + strandat 3718.248 kb on - strandat 3718.318 kb on + strandat 3718.319 kb on - strandat 3718.351 kb on - strandat 3718.351 kb on - strandat 3718.351 kb on - strandat 3718.433 kb on + strandat 3718.433 kb on + strandat 3718.440 kb on + strandat 3718.563 kb on - strandat 3718.718 kb on + strand, within Dsui_3456at 3718.810 kb on + strand, within Dsui_3456at 3718.810 kb on + strand, within Dsui_3456at 3718.830 kb on - strand, within Dsui_3456at 3718.867 kb on + strand, within Dsui_3456at 3719.033 kb on + strandat 3719.052 kb on - strandat 3719.223 kb on - strandat 3719.555 kb on - strand, within Dsui_3457at 3719.779 kb on - strand, within Dsui_3457at 3720.235 kb on - strand, within Dsui_3457at 3721.072 kb on + strandat 3721.173 kb on + strandat 3721.181 kb on - strandat 3721.233 kb on - strandat 3721.502 kb on - strand, within Dsui_3458at 3721.636 kb on + strand, within Dsui_3458at 3721.770 kb on + strand, within Dsui_3458at 3721.827 kb on + strand, within Dsui_3458at 3721.874 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction rich media
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3,718,144 + -0.4
3,718,240 + +0.1
3,718,248 - +0.9
3,718,318 + -0.6
3,718,319 - +1.0
3,718,351 - +0.0
3,718,351 - -2.5
3,718,351 - +0.1
3,718,433 + -0.7
3,718,433 + -0.4
3,718,440 + -1.6
3,718,563 - +0.1
3,718,718 + Dsui_3456 0.35 -0.4
3,718,810 + Dsui_3456 0.60 +0.6
3,718,810 + Dsui_3456 0.60 -0.0
3,718,830 - Dsui_3456 0.65 -0.9
3,718,867 + Dsui_3456 0.75 +0.0
3,719,033 + -0.1
3,719,052 - -0.1
3,719,223 - +0.1
3,719,555 - Dsui_3457 0.28 -1.1
3,719,779 - Dsui_3457 0.39 +0.3
3,720,235 - Dsui_3457 0.64 -1.1
3,721,072 + +0.9
3,721,173 + +1.9
3,721,181 - -0.3
3,721,233 - -0.8
3,721,502 - Dsui_3458 0.33 +0.9
3,721,636 + Dsui_3458 0.49 -0.7
3,721,770 + Dsui_3458 0.65 -0.1
3,721,827 + Dsui_3458 0.72 +0.8
3,721,874 - +0.9

Or see this region's nucleotide sequence