Experiment: rich media
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2623 and Dsui_2625 are separated by 674 nucleotides Dsui_2625 and Dsui_2626 are separated by 93 nucleotides
Dsui_2623: Dsui_2623 - site-specific recombinase XerD, at 2,776,311 to 2,777,489
_2623
Dsui_2625: Dsui_2625 - hypothetical protein, at 2,778,164 to 2,778,934
_2625
Dsui_2626: Dsui_2626 - Plasmid replication region DNA-binding N-term protein, at 2,779,028 to 2,780,104
_2626
Position (kb)
2778
2779 Strain fitness (log2 ratio)
-2
-1
0
1 at 2777.196 kb on + strand, within Dsui_2623 at 2777.204 kb on - strand, within Dsui_2623 at 2777.209 kb on - strand, within Dsui_2623 at 2777.245 kb on + strand, within Dsui_2623 at 2777.247 kb on + strand, within Dsui_2623 at 2777.331 kb on - strand, within Dsui_2623 at 2777.379 kb on + strand at 2777.419 kb on + strand at 2777.425 kb on + strand at 2777.484 kb on - strand at 2777.600 kb on - strand at 2777.632 kb on + strand at 2777.645 kb on + strand at 2777.715 kb on + strand at 2777.715 kb on + strand at 2777.719 kb on - strand at 2777.723 kb on - strand at 2777.725 kb on + strand at 2777.737 kb on + strand at 2777.742 kb on - strand at 2777.763 kb on - strand at 2777.763 kb on - strand at 2777.809 kb on + strand at 2777.809 kb on + strand at 2777.809 kb on + strand at 2777.809 kb on + strand at 2777.809 kb on + strand at 2777.809 kb on + strand at 2777.812 kb on - strand at 2777.817 kb on - strand at 2777.817 kb on - strand at 2777.817 kb on - strand at 2777.819 kb on + strand at 2777.819 kb on + strand at 2777.819 kb on + strand at 2777.856 kb on + strand at 2777.857 kb on - strand at 2777.864 kb on - strand at 2777.864 kb on - strand at 2777.891 kb on - strand at 2777.893 kb on - strand at 2777.911 kb on + strand at 2777.911 kb on + strand at 2777.911 kb on + strand at 2777.911 kb on + strand at 2777.911 kb on + strand at 2777.911 kb on + strand at 2777.911 kb on + strand at 2777.911 kb on + strand at 2777.911 kb on + strand at 2777.916 kb on + strand at 2777.919 kb on - strand at 2777.954 kb on - strand at 2777.965 kb on + strand at 2777.965 kb on + strand at 2778.008 kb on - strand at 2778.009 kb on - strand at 2778.009 kb on - strand at 2778.011 kb on + strand at 2778.011 kb on + strand at 2778.011 kb on + strand at 2778.071 kb on + strand at 2778.079 kb on + strand at 2778.079 kb on + strand at 2778.079 kb on + strand at 2778.086 kb on - strand at 2778.087 kb on - strand at 2778.092 kb on + strand at 2778.130 kb on - strand at 2778.174 kb on - strand at 2778.179 kb on + strand at 2778.184 kb on + strand at 2778.184 kb on + strand at 2778.184 kb on + strand at 2778.192 kb on - strand at 2778.192 kb on - strand at 2778.192 kb on - strand at 2778.192 kb on - strand at 2778.192 kb on - strand at 2778.219 kb on - strand at 2778.242 kb on - strand, within Dsui_2625 at 2778.247 kb on + strand, within Dsui_2625 at 2778.257 kb on + strand, within Dsui_2625 at 2778.265 kb on - strand, within Dsui_2625 at 2778.267 kb on + strand, within Dsui_2625 at 2778.282 kb on - strand, within Dsui_2625 at 2778.329 kb on + strand, within Dsui_2625 at 2778.334 kb on - strand, within Dsui_2625 at 2778.342 kb on - strand, within Dsui_2625 at 2778.343 kb on + strand, within Dsui_2625 at 2778.351 kb on - strand, within Dsui_2625 at 2778.353 kb on + strand, within Dsui_2625 at 2778.356 kb on - strand, within Dsui_2625 at 2778.359 kb on + strand, within Dsui_2625 at 2778.378 kb on + strand, within Dsui_2625 at 2778.378 kb on + strand, within Dsui_2625 at 2778.378 kb on + strand, within Dsui_2625 at 2778.386 kb on - strand, within Dsui_2625 at 2778.386 kb on - strand, within Dsui_2625 at 2778.386 kb on - strand, within Dsui_2625 at 2778.406 kb on + strand, within Dsui_2625 at 2778.406 kb on + strand, within Dsui_2625 at 2778.414 kb on - strand, within Dsui_2625 at 2778.414 kb on - strand, within Dsui_2625 at 2778.414 kb on - strand, within Dsui_2625 at 2778.500 kb on + strand, within Dsui_2625 at 2778.512 kb on + strand, within Dsui_2625 at 2778.520 kb on - strand, within Dsui_2625 at 2778.577 kb on - strand, within Dsui_2625 at 2778.577 kb on - strand, within Dsui_2625 at 2778.577 kb on - strand, within Dsui_2625 at 2778.587 kb on - strand, within Dsui_2625 at 2778.587 kb on - strand, within Dsui_2625 at 2778.602 kb on + strand, within Dsui_2625 at 2778.612 kb on - strand, within Dsui_2625 at 2778.615 kb on + strand, within Dsui_2625 at 2778.615 kb on + strand, within Dsui_2625 at 2778.620 kb on + strand, within Dsui_2625 at 2778.620 kb on + strand, within Dsui_2625 at 2778.620 kb on + strand, within Dsui_2625 at 2778.623 kb on - strand, within Dsui_2625 at 2778.623 kb on - strand, within Dsui_2625 at 2778.627 kb on - strand, within Dsui_2625 at 2778.639 kb on + strand, within Dsui_2625 at 2778.640 kb on - strand, within Dsui_2625 at 2778.646 kb on + strand, within Dsui_2625 at 2778.648 kb on - strand, within Dsui_2625 at 2778.648 kb on - strand, within Dsui_2625 at 2778.654 kb on - strand, within Dsui_2625 at 2778.672 kb on + strand, within Dsui_2625 at 2778.681 kb on - strand, within Dsui_2625 at 2778.699 kb on - strand, within Dsui_2625 at 2778.719 kb on - strand, within Dsui_2625 at 2778.725 kb on - strand, within Dsui_2625 at 2778.730 kb on + strand, within Dsui_2625 at 2778.738 kb on - strand, within Dsui_2625 at 2778.739 kb on - strand, within Dsui_2625 at 2778.758 kb on + strand, within Dsui_2625 at 2778.771 kb on + strand, within Dsui_2625 at 2778.776 kb on + strand, within Dsui_2625 at 2778.779 kb on - strand, within Dsui_2625 at 2778.779 kb on - strand, within Dsui_2625 at 2778.786 kb on + strand, within Dsui_2625 at 2778.794 kb on - strand, within Dsui_2625 at 2778.815 kb on + strand, within Dsui_2625 at 2778.833 kb on + strand, within Dsui_2625 at 2778.858 kb on - strand at 2778.863 kb on + strand at 2778.900 kb on + strand at 2778.940 kb on + strand at 2778.940 kb on + strand at 2778.975 kb on + strand at 2778.994 kb on + strand at 2779.002 kb on - strand at 2779.060 kb on + strand at 2779.073 kb on - strand at 2779.079 kb on - strand at 2779.079 kb on - strand at 2779.081 kb on + strand at 2779.088 kb on + strand at 2779.098 kb on + strand at 2779.103 kb on + strand at 2779.108 kb on + strand at 2779.108 kb on + strand at 2779.108 kb on + strand at 2779.116 kb on - strand at 2779.116 kb on - strand at 2779.163 kb on - strand, within Dsui_2626 at 2779.193 kb on + strand, within Dsui_2626 at 2779.233 kb on - strand, within Dsui_2626 at 2779.255 kb on + strand, within Dsui_2626 at 2779.257 kb on - strand, within Dsui_2626 at 2779.273 kb on - strand, within Dsui_2626 at 2779.273 kb on - strand, within Dsui_2626 at 2779.278 kb on - strand, within Dsui_2626 at 2779.279 kb on - strand, within Dsui_2626 at 2779.332 kb on + strand, within Dsui_2626 at 2779.388 kb on - strand, within Dsui_2626 at 2779.414 kb on + strand, within Dsui_2626 at 2779.457 kb on + strand, within Dsui_2626 at 2779.553 kb on - strand, within Dsui_2626 at 2779.564 kb on + strand at 2779.607 kb on - strand, within Dsui_2626 at 2779.612 kb on - strand, within Dsui_2626 at 2779.631 kb on + strand, within Dsui_2626 at 2779.664 kb on - strand, within Dsui_2626 at 2779.682 kb on - strand, within Dsui_2626 at 2779.696 kb on + strand, within Dsui_2626 at 2779.704 kb on - strand, within Dsui_2626 at 2779.704 kb on - strand, within Dsui_2626 at 2779.704 kb on - strand, within Dsui_2626 at 2779.704 kb on - strand, within Dsui_2626 at 2779.730 kb on + strand, within Dsui_2626 at 2779.738 kb on - strand, within Dsui_2626 at 2779.752 kb on - strand, within Dsui_2626 at 2779.773 kb on + strand, within Dsui_2626 at 2779.802 kb on - strand, within Dsui_2626 at 2779.818 kb on + strand, within Dsui_2626 at 2779.823 kb on + strand, within Dsui_2626 at 2779.825 kb on + strand, within Dsui_2626 at 2779.842 kb on + strand, within Dsui_2626 at 2779.845 kb on - strand, within Dsui_2626 at 2779.845 kb on - strand, within Dsui_2626 at 2779.845 kb on - strand, within Dsui_2626 at 2779.872 kb on + strand, within Dsui_2626 at 2779.880 kb on - strand, within Dsui_2626 at 2779.880 kb on - strand, within Dsui_2626 at 2779.884 kb on - strand, within Dsui_2626 at 2779.887 kb on + strand, within Dsui_2626 at 2779.894 kb on + strand, within Dsui_2626 at 2779.903 kb on - strand, within Dsui_2626 at 2779.903 kb on - strand, within Dsui_2626 at 2779.914 kb on + strand, within Dsui_2626 at 2779.932 kb on - strand, within Dsui_2626
Per-strain Table
Position Strand Gene LocusTag Fraction rich media remove 2,777,196 + Dsui_2623 0.75 -0.3 2,777,204 - Dsui_2623 0.76 +0.0 2,777,209 - Dsui_2623 0.76 -0.6 2,777,245 + Dsui_2623 0.79 -0.6 2,777,247 + Dsui_2623 0.79 -0.4 2,777,331 - Dsui_2623 0.87 -0.2 2,777,379 + -0.3 2,777,419 + -0.5 2,777,425 + -0.6 2,777,484 - +0.5 2,777,600 - -0.4 2,777,632 + -0.2 2,777,645 + -0.6 2,777,715 + -0.4 2,777,715 + -0.7 2,777,719 - -0.5 2,777,723 - +0.2 2,777,725 + -0.6 2,777,737 + -0.3 2,777,742 - -0.5 2,777,763 - -0.6 2,777,763 - -0.4 2,777,809 + -0.5 2,777,809 + -0.3 2,777,809 + -0.3 2,777,809 + -0.6 2,777,809 + -0.1 2,777,809 + -0.5 2,777,812 - -0.5 2,777,817 - -0.2 2,777,817 - -0.3 2,777,817 - -2.0 2,777,819 + -0.5 2,777,819 + -0.1 2,777,819 + -0.3 2,777,856 + -0.5 2,777,857 - -0.5 2,777,864 - -0.2 2,777,864 - -0.2 2,777,891 - -0.2 2,777,893 - -0.3 2,777,911 + -0.1 2,777,911 + -1.1 2,777,911 + -0.4 2,777,911 + -0.3 2,777,911 + -0.4 2,777,911 + -1.0 2,777,911 + -0.4 2,777,911 + -0.2 2,777,911 + +0.0 2,777,916 + -0.3 2,777,919 - -0.7 2,777,954 - -0.3 2,777,965 + -0.2 2,777,965 + -1.6 2,778,008 - -0.7 2,778,009 - -0.1 2,778,009 - -0.4 2,778,011 + +0.5 2,778,011 + -0.6 2,778,011 + -0.2 2,778,071 + -0.9 2,778,079 + -0.5 2,778,079 + -0.4 2,778,079 + -0.6 2,778,086 - -0.5 2,778,087 - -0.3 2,778,092 + -0.1 2,778,130 - -0.3 2,778,174 - -0.6 2,778,179 + -1.2 2,778,184 + -0.7 2,778,184 + -0.2 2,778,184 + -0.2 2,778,192 - -0.4 2,778,192 - -0.4 2,778,192 - -0.1 2,778,192 - -0.4 2,778,192 - -0.4 2,778,219 - -0.9 2,778,242 - Dsui_2625 0.10 -0.3 2,778,247 + Dsui_2625 0.11 -0.9 2,778,257 + Dsui_2625 0.12 +0.4 2,778,265 - Dsui_2625 0.13 -0.2 2,778,267 + Dsui_2625 0.13 -0.5 2,778,282 - Dsui_2625 0.15 -0.4 2,778,329 + Dsui_2625 0.21 -0.5 2,778,334 - Dsui_2625 0.22 -0.6 2,778,342 - Dsui_2625 0.23 -0.5 2,778,343 + Dsui_2625 0.23 -1.1 2,778,351 - Dsui_2625 0.24 -0.3 2,778,353 + Dsui_2625 0.25 -0.8 2,778,356 - Dsui_2625 0.25 -0.4 2,778,359 + Dsui_2625 0.25 -0.8 2,778,378 + Dsui_2625 0.28 +0.2 2,778,378 + Dsui_2625 0.28 +0.2 2,778,378 + Dsui_2625 0.28 -1.2 2,778,386 - Dsui_2625 0.29 -0.4 2,778,386 - Dsui_2625 0.29 -0.3 2,778,386 - Dsui_2625 0.29 -0.5 2,778,406 + Dsui_2625 0.31 +0.9 2,778,406 + Dsui_2625 0.31 -0.6 2,778,414 - Dsui_2625 0.32 -0.6 2,778,414 - Dsui_2625 0.32 -0.4 2,778,414 - Dsui_2625 0.32 -0.4 2,778,500 + Dsui_2625 0.44 -1.5 2,778,512 + Dsui_2625 0.45 +0.3 2,778,520 - Dsui_2625 0.46 -0.6 2,778,577 - Dsui_2625 0.54 -0.5 2,778,577 - Dsui_2625 0.54 -0.4 2,778,577 - Dsui_2625 0.54 -0.6 2,778,587 - Dsui_2625 0.55 -0.3 2,778,587 - Dsui_2625 0.55 -0.2 2,778,602 + Dsui_2625 0.57 -0.8 2,778,612 - Dsui_2625 0.58 -0.2 2,778,615 + Dsui_2625 0.58 -0.5 2,778,615 + Dsui_2625 0.58 -0.4 2,778,620 + Dsui_2625 0.59 -2.1 2,778,620 + Dsui_2625 0.59 -0.3 2,778,620 + Dsui_2625 0.59 +0.4 2,778,623 - Dsui_2625 0.60 -0.4 2,778,623 - Dsui_2625 0.60 -0.4 2,778,627 - Dsui_2625 0.60 -0.4 2,778,639 + Dsui_2625 0.62 -1.5 2,778,640 - Dsui_2625 0.62 -0.0 2,778,646 + Dsui_2625 0.63 -1.6 2,778,648 - Dsui_2625 0.63 -0.4 2,778,648 - Dsui_2625 0.63 -0.3 2,778,654 - Dsui_2625 0.64 -0.6 2,778,672 + Dsui_2625 0.66 -1.0 2,778,681 - Dsui_2625 0.67 -0.4 2,778,699 - Dsui_2625 0.69 -0.1 2,778,719 - Dsui_2625 0.72 -0.3 2,778,725 - Dsui_2625 0.73 -0.5 2,778,730 + Dsui_2625 0.73 -1.0 2,778,738 - Dsui_2625 0.74 -0.5 2,778,739 - Dsui_2625 0.75 +0.0 2,778,758 + Dsui_2625 0.77 -0.4 2,778,771 + Dsui_2625 0.79 -0.6 2,778,776 + Dsui_2625 0.79 -0.4 2,778,779 - Dsui_2625 0.80 -0.1 2,778,779 - Dsui_2625 0.80 -0.4 2,778,786 + Dsui_2625 0.81 -0.2 2,778,794 - Dsui_2625 0.82 -0.2 2,778,815 + Dsui_2625 0.84 -0.3 2,778,833 + Dsui_2625 0.87 -0.4 2,778,858 - -0.2 2,778,863 + -0.2 2,778,900 + +0.2 2,778,940 + -0.3 2,778,940 + -0.6 2,778,975 + -1.0 2,778,994 + -0.7 2,779,002 - -0.3 2,779,060 + -0.5 2,779,073 - -0.8 2,779,079 - -0.4 2,779,079 - -0.3 2,779,081 + -0.9 2,779,088 + -0.4 2,779,098 + -0.3 2,779,103 + -0.2 2,779,108 + -0.2 2,779,108 + -0.6 2,779,108 + -2.7 2,779,116 - -0.1 2,779,116 - -0.4 2,779,163 - Dsui_2626 0.13 -0.6 2,779,193 + Dsui_2626 0.15 -0.1 2,779,233 - Dsui_2626 0.19 -0.4 2,779,255 + Dsui_2626 0.21 -0.5 2,779,257 - Dsui_2626 0.21 -0.2 2,779,273 - Dsui_2626 0.23 -0.3 2,779,273 - Dsui_2626 0.23 -0.4 2,779,278 - Dsui_2626 0.23 -0.4 2,779,279 - Dsui_2626 0.23 -0.2 2,779,332 + Dsui_2626 0.28 -2.0 2,779,388 - Dsui_2626 0.33 -0.1 2,779,414 + Dsui_2626 0.36 -0.1 2,779,457 + Dsui_2626 0.40 -0.6 2,779,553 - Dsui_2626 0.49 -0.3 2,779,564 + +0.5 2,779,607 - Dsui_2626 0.54 -1.1 2,779,612 - Dsui_2626 0.54 -0.2 2,779,631 + Dsui_2626 0.56 -0.9 2,779,664 - Dsui_2626 0.59 -0.2 2,779,682 - Dsui_2626 0.61 -0.4 2,779,696 + Dsui_2626 0.62 +0.5 2,779,704 - Dsui_2626 0.63 -0.4 2,779,704 - Dsui_2626 0.63 -0.5 2,779,704 - Dsui_2626 0.63 -0.4 2,779,704 - Dsui_2626 0.63 -0.5 2,779,730 + Dsui_2626 0.65 -1.5 2,779,738 - Dsui_2626 0.66 -0.4 2,779,752 - Dsui_2626 0.67 -0.4 2,779,773 + Dsui_2626 0.69 -0.7 2,779,802 - Dsui_2626 0.72 -0.4 2,779,818 + Dsui_2626 0.73 +0.2 2,779,823 + Dsui_2626 0.74 -1.2 2,779,825 + Dsui_2626 0.74 -0.2 2,779,842 + Dsui_2626 0.76 -0.2 2,779,845 - Dsui_2626 0.76 -0.7 2,779,845 - Dsui_2626 0.76 -0.5 2,779,845 - Dsui_2626 0.76 -0.2 2,779,872 + Dsui_2626 0.78 +0.5 2,779,880 - Dsui_2626 0.79 -0.4 2,779,880 - Dsui_2626 0.79 -0.4 2,779,884 - Dsui_2626 0.79 -0.6 2,779,887 + Dsui_2626 0.80 -1.5 2,779,894 + Dsui_2626 0.80 -1.1 2,779,903 - Dsui_2626 0.81 -0.3 2,779,903 - Dsui_2626 0.81 -0.4 2,779,914 + Dsui_2626 0.82 +0.2 2,779,932 - Dsui_2626 0.84 -0.5
Or see this region's nucleotide sequence