Strain Fitness in Dechlorosoma suillum PS around Dsui_2619

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2617 and Dsui_2618 are separated by 18 nucleotidesDsui_2618 and Dsui_2619 are separated by 40 nucleotidesDsui_2619 and Dsui_2620 are separated by 4 nucleotides Dsui_2617: Dsui_2617 - DNA recombination-dependent growth factor C, at 2,770,266 to 2,771,168 _2617 Dsui_2618: Dsui_2618 - putative transcriptional regulator, at 2,771,187 to 2,771,405 _2618 Dsui_2619: Dsui_2619 - hypothetical protein, at 2,771,446 to 2,771,676 _2619 Dsui_2620: Dsui_2620 - hypothetical protein, at 2,771,681 to 2,773,621 _2620 Position (kb) 2771 2772Strain fitness (log2 ratio) -1 0 1at 2770.520 kb on + strand, within Dsui_2617at 2771.592 kb on + strand, within Dsui_2619at 2771.730 kb on + strandat 2771.730 kb on + strandat 2771.735 kb on + strandat 2771.790 kb on - strandat 2771.803 kb on + strandat 2771.906 kb on - strand, within Dsui_2620at 2772.105 kb on - strand, within Dsui_2620at 2772.213 kb on + strand, within Dsui_2620at 2772.251 kb on + strand, within Dsui_2620at 2772.341 kb on + strand, within Dsui_2620at 2772.450 kb on - strand, within Dsui_2620at 2772.456 kb on - strand, within Dsui_2620at 2772.467 kb on - strand, within Dsui_2620at 2772.542 kb on + strand, within Dsui_2620at 2772.610 kb on - strand, within Dsui_2620at 2772.616 kb on + strandat 2772.636 kb on + strand, within Dsui_2620at 2772.644 kb on - strand, within Dsui_2620at 2772.659 kb on + strand, within Dsui_2620at 2772.659 kb on + strand, within Dsui_2620

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Per-strain Table

Position Strand Gene LocusTag Fraction rich media
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2,770,520 + Dsui_2617 0.28 -0.9
2,771,592 + Dsui_2619 0.63 +1.4
2,771,730 + -0.5
2,771,730 + -0.9
2,771,735 + +0.7
2,771,790 - -0.5
2,771,803 + -0.7
2,771,906 - Dsui_2620 0.12 +0.1
2,772,105 - Dsui_2620 0.22 -1.3
2,772,213 + Dsui_2620 0.27 -0.8
2,772,251 + Dsui_2620 0.29 -0.9
2,772,341 + Dsui_2620 0.34 -1.2
2,772,450 - Dsui_2620 0.40 -0.3
2,772,456 - Dsui_2620 0.40 -0.7
2,772,467 - Dsui_2620 0.40 -0.9
2,772,542 + Dsui_2620 0.44 -0.3
2,772,610 - Dsui_2620 0.48 +0.3
2,772,616 + +0.1
2,772,636 + Dsui_2620 0.49 +0.1
2,772,644 - Dsui_2620 0.50 -0.5
2,772,659 + Dsui_2620 0.50 +1.1
2,772,659 + Dsui_2620 0.50 -1.3

Or see this region's nucleotide sequence