Strain Fitness in Dechlorosoma suillum PS around Dsui_2597

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2595 and Dsui_2596 are separated by 60 nucleotidesDsui_2596 and Dsui_2597 are separated by 32 nucleotidesDsui_2597 and Dsui_2598 are separated by 79 nucleotides Dsui_2595: Dsui_2595 - type II secretory pathway, pseudopilin PulG, at 2,750,273 to 2,751,646 _2595 Dsui_2596: Dsui_2596 - methyltransferase family protein, at 2,751,707 to 2,752,408 _2596 Dsui_2597: Dsui_2597 - tyrosine recombinase XerD, at 2,752,441 to 2,753,355 _2597 Dsui_2598: Dsui_2598 - hypothetical protein, at 2,753,435 to 2,754,256 _2598 Position (kb) 2752 2753 2754Strain fitness (log2 ratio) -2 -1 0 1at 2751.458 kb on + strandat 2751.458 kb on + strand, within Dsui_2595at 2751.524 kb on - strandat 2751.664 kb on + strandat 2751.675 kb on + strandat 2751.675 kb on + strandat 2751.675 kb on + strandat 2751.675 kb on + strandat 2751.675 kb on + strandat 2751.707 kb on + strandat 2751.728 kb on + strandat 2751.776 kb on + strandat 2751.776 kb on + strandat 2751.776 kb on + strandat 2751.776 kb on + strandat 2751.776 kb on + strandat 2751.776 kb on + strandat 2751.784 kb on - strandat 2751.792 kb on - strand, within Dsui_2596at 2751.795 kb on + strand, within Dsui_2596at 2751.795 kb on + strand, within Dsui_2596at 2751.803 kb on - strandat 2751.817 kb on + strand, within Dsui_2596at 2751.891 kb on - strand, within Dsui_2596at 2751.891 kb on - strand, within Dsui_2596at 2751.909 kb on + strand, within Dsui_2596at 2751.909 kb on + strand, within Dsui_2596at 2751.922 kb on + strand, within Dsui_2596at 2751.983 kb on + strand, within Dsui_2596at 2751.983 kb on + strand, within Dsui_2596at 2751.992 kb on - strand, within Dsui_2596at 2752.020 kb on + strand, within Dsui_2596at 2752.036 kb on + strand, within Dsui_2596at 2752.041 kb on + strand, within Dsui_2596at 2752.075 kb on + strand, within Dsui_2596at 2752.089 kb on - strand, within Dsui_2596at 2752.134 kb on + strand, within Dsui_2596at 2752.259 kb on + strand, within Dsui_2596at 2752.267 kb on - strand, within Dsui_2596at 2752.360 kb on + strandat 2752.373 kb on + strandat 2752.453 kb on - strandat 2752.459 kb on - strandat 2752.464 kb on - strandat 2752.465 kb on - strandat 2752.497 kb on - strandat 2752.502 kb on - strandat 2752.532 kb on + strandat 2752.548 kb on - strand, within Dsui_2597at 2752.568 kb on + strand, within Dsui_2597at 2752.634 kb on + strand, within Dsui_2597at 2752.761 kb on - strand, within Dsui_2597at 2752.785 kb on + strand, within Dsui_2597at 2752.832 kb on - strand, within Dsui_2597at 2752.859 kb on + strand, within Dsui_2597at 2752.867 kb on - strand, within Dsui_2597at 2752.889 kb on - strand, within Dsui_2597at 2752.889 kb on - strand, within Dsui_2597at 2752.889 kb on - strand, within Dsui_2597at 2752.895 kb on - strand, within Dsui_2597at 2752.895 kb on - strand, within Dsui_2597at 2752.895 kb on - strand, within Dsui_2597at 2752.911 kb on + strand, within Dsui_2597at 2752.920 kb on + strand, within Dsui_2597at 2752.968 kb on + strand, within Dsui_2597at 2752.983 kb on - strand, within Dsui_2597at 2753.014 kb on + strand, within Dsui_2597at 2753.022 kb on - strand, within Dsui_2597at 2753.134 kb on - strand, within Dsui_2597at 2753.166 kb on + strand, within Dsui_2597at 2753.179 kb on - strand, within Dsui_2597at 2753.454 kb on - strandat 2753.496 kb on + strandat 2753.523 kb on - strand, within Dsui_2598at 2753.527 kb on + strand, within Dsui_2598at 2753.581 kb on + strand, within Dsui_2598at 2753.589 kb on - strand, within Dsui_2598at 2753.589 kb on - strand, within Dsui_2598at 2753.595 kb on + strand, within Dsui_2598at 2753.595 kb on - strand, within Dsui_2598at 2753.619 kb on + strand, within Dsui_2598at 2753.637 kb on - strand, within Dsui_2598at 2753.761 kb on + strand, within Dsui_2598at 2753.777 kb on + strand, within Dsui_2598at 2753.785 kb on - strand, within Dsui_2598at 2753.785 kb on - strand, within Dsui_2598at 2753.785 kb on - strand, within Dsui_2598at 2753.818 kb on - strand, within Dsui_2598at 2753.827 kb on + strand, within Dsui_2598at 2753.828 kb on - strand, within Dsui_2598at 2753.863 kb on + strand, within Dsui_2598at 2753.869 kb on + strand, within Dsui_2598at 2753.905 kb on + strand, within Dsui_2598at 2753.905 kb on + strand, within Dsui_2598at 2753.905 kb on + strand, within Dsui_2598at 2753.913 kb on - strand, within Dsui_2598at 2753.913 kb on - strand, within Dsui_2598at 2753.913 kb on - strand, within Dsui_2598at 2753.968 kb on + strand, within Dsui_2598at 2754.094 kb on + strand, within Dsui_2598at 2754.203 kb on - strandat 2754.215 kb on - strandat 2754.290 kb on + strandat 2754.293 kb on - strandat 2754.354 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction rich media
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2,751,458 + +1.1
2,751,458 + Dsui_2595 0.86 -0.9
2,751,524 - +0.5
2,751,664 + -0.5
2,751,675 + -1.5
2,751,675 + -0.6
2,751,675 + -0.5
2,751,675 + -0.5
2,751,675 + -0.8
2,751,707 + -0.5
2,751,728 + -0.4
2,751,776 + -0.6
2,751,776 + +0.2
2,751,776 + -0.3
2,751,776 + -0.4
2,751,776 + -0.3
2,751,776 + -1.1
2,751,784 - +1.1
2,751,792 - Dsui_2596 0.12 -1.5
2,751,795 + Dsui_2596 0.13 -0.4
2,751,795 + Dsui_2596 0.13 -0.5
2,751,803 - +1.7
2,751,817 + Dsui_2596 0.16 -0.2
2,751,891 - Dsui_2596 0.26 -1.0
2,751,891 - Dsui_2596 0.26 -2.4
2,751,909 + Dsui_2596 0.29 -0.1
2,751,909 + Dsui_2596 0.29 -0.3
2,751,922 + Dsui_2596 0.31 -0.4
2,751,983 + Dsui_2596 0.39 +0.1
2,751,983 + Dsui_2596 0.39 -0.6
2,751,992 - Dsui_2596 0.41 -0.5
2,752,020 + Dsui_2596 0.45 -0.7
2,752,036 + Dsui_2596 0.47 -0.7
2,752,041 + Dsui_2596 0.48 -0.7
2,752,075 + Dsui_2596 0.52 -0.0
2,752,089 - Dsui_2596 0.54 -0.0
2,752,134 + Dsui_2596 0.61 -0.3
2,752,259 + Dsui_2596 0.79 -0.7
2,752,267 - Dsui_2596 0.80 +0.3
2,752,360 + -1.1
2,752,373 + -0.2
2,752,453 - +0.0
2,752,459 - -2.7
2,752,464 - -1.0
2,752,465 - -0.3
2,752,497 - -0.3
2,752,502 - -0.1
2,752,532 + -1.2
2,752,548 - Dsui_2597 0.12 -0.4
2,752,568 + Dsui_2597 0.14 -1.5
2,752,634 + Dsui_2597 0.21 -0.8
2,752,761 - Dsui_2597 0.35 -0.6
2,752,785 + Dsui_2597 0.38 -0.3
2,752,832 - Dsui_2597 0.43 -0.6
2,752,859 + Dsui_2597 0.46 -0.5
2,752,867 - Dsui_2597 0.47 -0.2
2,752,889 - Dsui_2597 0.49 +0.4
2,752,889 - Dsui_2597 0.49 -1.0
2,752,889 - Dsui_2597 0.49 -2.1
2,752,895 - Dsui_2597 0.50 -0.5
2,752,895 - Dsui_2597 0.50 -0.1
2,752,895 - Dsui_2597 0.50 -0.5
2,752,911 + Dsui_2597 0.51 -0.4
2,752,920 + Dsui_2597 0.52 -1.0
2,752,968 + Dsui_2597 0.58 -0.3
2,752,983 - Dsui_2597 0.59 -0.2
2,753,014 + Dsui_2597 0.63 -0.6
2,753,022 - Dsui_2597 0.63 +0.3
2,753,134 - Dsui_2597 0.76 -1.0
2,753,166 + Dsui_2597 0.79 +0.1
2,753,179 - Dsui_2597 0.81 +0.3
2,753,454 - -1.0
2,753,496 + -0.5
2,753,523 - Dsui_2598 0.11 -0.6
2,753,527 + Dsui_2598 0.11 -0.4
2,753,581 + Dsui_2598 0.18 -0.5
2,753,589 - Dsui_2598 0.19 -0.3
2,753,589 - Dsui_2598 0.19 -0.6
2,753,595 + Dsui_2598 0.19 -0.5
2,753,595 - Dsui_2598 0.19 -1.5
2,753,619 + Dsui_2598 0.22 +0.4
2,753,637 - Dsui_2598 0.25 -1.1
2,753,761 + Dsui_2598 0.40 +0.4
2,753,777 + Dsui_2598 0.42 +0.1
2,753,785 - Dsui_2598 0.43 -1.5
2,753,785 - Dsui_2598 0.43 -0.5
2,753,785 - Dsui_2598 0.43 -0.6
2,753,818 - Dsui_2598 0.47 -1.2
2,753,827 + Dsui_2598 0.48 -0.9
2,753,828 - Dsui_2598 0.48 +0.4
2,753,863 + Dsui_2598 0.52 -0.6
2,753,869 + Dsui_2598 0.53 -0.4
2,753,905 + Dsui_2598 0.57 -0.5
2,753,905 + Dsui_2598 0.57 -1.1
2,753,905 + Dsui_2598 0.57 -0.4
2,753,913 - Dsui_2598 0.58 -0.7
2,753,913 - Dsui_2598 0.58 -1.9
2,753,913 - Dsui_2598 0.58 -0.7
2,753,968 + Dsui_2598 0.65 +0.5
2,754,094 + Dsui_2598 0.80 -0.0
2,754,203 - -0.5
2,754,215 - -1.2
2,754,290 + -0.1
2,754,293 - -0.7
2,754,354 + -1.9

Or see this region's nucleotide sequence