Strain Fitness in Dechlorosoma suillum PS around Dsui_2249

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2247 and Dsui_2248 are separated by 40 nucleotidesDsui_2248 and Dsui_2249 overlap by 4 nucleotidesDsui_2249 and Dsui_2250 are separated by 60 nucleotides Dsui_2247: Dsui_2247 - cytochrome b, at 2,394,518 to 2,395,177 _2247 Dsui_2248: Dsui_2248 - response regulator with CheY-like receiver domain and winged-helix DNA-binding domain, at 2,395,218 to 2,395,895 _2248 Dsui_2249: Dsui_2249 - signal transduction histidine kinase, at 2,395,892 to 2,397,259 _2249 Dsui_2250: Dsui_2250 - putative domain HDIG-containing protein, at 2,397,320 to 2,398,582 _2250 Position (kb) 2395 2396 2397 2398Strain fitness (log2 ratio) -2 -1 0 1 2 3at 2394.993 kb on - strand, within Dsui_2247at 2395.084 kb on - strandat 2395.194 kb on + strandat 2395.530 kb on - strandat 2395.698 kb on + strand, within Dsui_2248at 2395.724 kb on + strand, within Dsui_2248at 2395.755 kb on + strand, within Dsui_2248at 2395.755 kb on + strand, within Dsui_2248at 2395.783 kb on + strandat 2395.902 kb on + strandat 2395.902 kb on + strandat 2395.925 kb on + strandat 2395.954 kb on + strandat 2396.022 kb on - strandat 2396.297 kb on + strand, within Dsui_2249at 2396.305 kb on - strand, within Dsui_2249at 2396.369 kb on + strand, within Dsui_2249at 2396.461 kb on - strandat 2396.467 kb on + strand, within Dsui_2249at 2396.524 kb on - strandat 2396.539 kb on + strand, within Dsui_2249at 2396.539 kb on + strand, within Dsui_2249at 2396.539 kb on + strandat 2396.539 kb on + strand, within Dsui_2249at 2396.547 kb on - strandat 2396.547 kb on - strand, within Dsui_2249at 2396.547 kb on - strandat 2396.603 kb on + strand, within Dsui_2249at 2396.611 kb on - strandat 2397.113 kb on + strand, within Dsui_2249at 2397.114 kb on + strand, within Dsui_2249at 2397.206 kb on + strandat 2397.291 kb on - strandat 2397.301 kb on - strandat 2397.326 kb on + strandat 2397.365 kb on + strandat 2397.479 kb on + strand, within Dsui_2250at 2397.513 kb on + strand, within Dsui_2250at 2397.513 kb on + strandat 2397.999 kb on + strand, within Dsui_2250at 2398.056 kb on - strandat 2398.157 kb on + strandat 2398.251 kb on + strand, within Dsui_2250

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Per-strain Table

Position Strand Gene LocusTag Fraction rich media
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2,394,993 - Dsui_2247 0.72 -0.7
2,395,084 - +0.9
2,395,194 + +1.3
2,395,530 - +1.9
2,395,698 + Dsui_2248 0.71 -0.4
2,395,724 + Dsui_2248 0.75 -0.0
2,395,755 + Dsui_2248 0.79 -1.6
2,395,755 + Dsui_2248 0.79 -2.0
2,395,783 + +1.5
2,395,902 + -0.4
2,395,902 + +0.6
2,395,925 + +0.2
2,395,954 + -1.1
2,396,022 - +1.9
2,396,297 + Dsui_2249 0.30 +1.9
2,396,305 - Dsui_2249 0.30 +2.9
2,396,369 + Dsui_2249 0.35 -0.5
2,396,461 - -0.4
2,396,467 + Dsui_2249 0.42 +0.8
2,396,524 - +2.3
2,396,539 + Dsui_2249 0.47 +0.9
2,396,539 + Dsui_2249 0.47 -0.2
2,396,539 + -0.1
2,396,539 + Dsui_2249 0.47 +1.9
2,396,547 - +1.3
2,396,547 - Dsui_2249 0.48 -0.1
2,396,547 - +1.9
2,396,603 + Dsui_2249 0.52 -1.1
2,396,611 - +0.3
2,397,113 + Dsui_2249 0.89 -0.1
2,397,114 + Dsui_2249 0.89 +0.0
2,397,206 + +0.9
2,397,291 - +1.9
2,397,301 - +1.9
2,397,326 + +0.1
2,397,365 + -0.1
2,397,479 + Dsui_2250 0.13 -0.7
2,397,513 + Dsui_2250 0.15 +1.3
2,397,513 + +1.9
2,397,999 + Dsui_2250 0.54 -0.9
2,398,056 - +0.9
2,398,157 + +1.9
2,398,251 + Dsui_2250 0.74 -1.7

Or see this region's nucleotide sequence