Strain Fitness in Dechlorosoma suillum PS around Dsui_2065

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2063 and Dsui_2064 are separated by 135 nucleotidesDsui_2064 and Dsui_2065 are separated by 46 nucleotidesDsui_2065 and Dsui_2066 are separated by 256 nucleotides Dsui_2063: Dsui_2063 - protein chain release factor B, at 2,182,123 to 2,182,521 _2063 Dsui_2064: Dsui_2064 - ABC-type metal ion transport system, periplasmic component/surface antigen, at 2,182,657 to 2,183,466 _2064 Dsui_2065: Dsui_2065 - hypothetical protein, contains double-stranded beta-helix domain, at 2,183,513 to 2,184,088 _2065 Dsui_2066: Dsui_2066 - ABC-type metal ion transport system, periplasmic component/surface antigen, at 2,184,345 to 2,185,148 _2066 Position (kb) 2183 2184 2185Strain fitness (log2 ratio) -1 0 1 2 3at 2182.516 kb on + strandat 2182.516 kb on + strandat 2182.523 kb on + strandat 2182.567 kb on - strandat 2182.636 kb on - strandat 2182.759 kb on - strand, within Dsui_2064at 2182.792 kb on - strand, within Dsui_2064at 2182.847 kb on - strand, within Dsui_2064at 2182.847 kb on - strand, within Dsui_2064at 2182.901 kb on - strand, within Dsui_2064at 2182.909 kb on - strand, within Dsui_2064at 2182.976 kb on + strand, within Dsui_2064at 2183.011 kb on - strand, within Dsui_2064at 2183.060 kb on + strandat 2183.070 kb on + strand, within Dsui_2064at 2183.166 kb on + strandat 2183.167 kb on + strandat 2183.175 kb on + strandat 2183.255 kb on - strand, within Dsui_2064at 2183.255 kb on - strand, within Dsui_2064at 2183.339 kb on - strand, within Dsui_2064at 2183.411 kb on + strandat 2183.421 kb on + strandat 2183.488 kb on + strandat 2183.506 kb on - strandat 2183.559 kb on - strandat 2183.619 kb on + strand, within Dsui_2065at 2183.640 kb on - strandat 2183.640 kb on - strand, within Dsui_2065at 2183.657 kb on - strand, within Dsui_2065at 2183.779 kb on - strand, within Dsui_2065at 2183.794 kb on - strand, within Dsui_2065at 2183.795 kb on - strand, within Dsui_2065at 2183.863 kb on - strand, within Dsui_2065at 2183.890 kb on + strand, within Dsui_2065at 2183.952 kb on - strand, within Dsui_2065at 2184.012 kb on - strand, within Dsui_2065at 2184.068 kb on + strandat 2184.095 kb on + strandat 2184.101 kb on - strandat 2184.244 kb on + strandat 2184.254 kb on - strandat 2184.288 kb on - strandat 2184.445 kb on + strand, within Dsui_2066at 2184.527 kb on + strand, within Dsui_2066at 2184.527 kb on + strandat 2184.607 kb on + strand, within Dsui_2066at 2184.693 kb on - strand, within Dsui_2066at 2184.737 kb on + strand, within Dsui_2066at 2184.766 kb on - strand, within Dsui_2066at 2184.792 kb on - strand, within Dsui_2066at 2184.926 kb on - strand, within Dsui_2066at 2184.933 kb on - strand, within Dsui_2066at 2185.019 kb on + strand, within Dsui_2066at 2185.026 kb on - strand, within Dsui_2066

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Per-strain Table

Position Strand Gene LocusTag Fraction rich media
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2,182,516 + +0.8
2,182,516 + +1.0
2,182,523 + -0.1
2,182,567 - +1.0
2,182,636 - +0.5
2,182,759 - Dsui_2064 0.13 -0.4
2,182,792 - Dsui_2064 0.17 +0.8
2,182,847 - Dsui_2064 0.23 -0.6
2,182,847 - Dsui_2064 0.23 +0.8
2,182,901 - Dsui_2064 0.30 +0.5
2,182,909 - Dsui_2064 0.31 +0.0
2,182,976 + Dsui_2064 0.39 +1.0
2,183,011 - Dsui_2064 0.44 -0.0
2,183,060 + +0.6
2,183,070 + Dsui_2064 0.51 +0.6
2,183,166 + -0.4
2,183,167 + +3.0
2,183,175 + +0.6
2,183,255 - Dsui_2064 0.74 -0.2
2,183,255 - Dsui_2064 0.74 -0.1
2,183,339 - Dsui_2064 0.84 +0.2
2,183,411 + +0.5
2,183,421 + +0.4
2,183,488 + +3.0
2,183,506 - +0.2
2,183,559 - -0.8
2,183,619 + Dsui_2065 0.18 -1.5
2,183,640 - +0.4
2,183,640 - Dsui_2065 0.22 -0.2
2,183,657 - Dsui_2065 0.25 -0.4
2,183,779 - Dsui_2065 0.46 +0.1
2,183,794 - Dsui_2065 0.49 +0.9
2,183,795 - Dsui_2065 0.49 -0.5
2,183,863 - Dsui_2065 0.61 -0.5
2,183,890 + Dsui_2065 0.65 +0.8
2,183,952 - Dsui_2065 0.76 +0.3
2,184,012 - Dsui_2065 0.87 -0.1
2,184,068 + +2.0
2,184,095 + +0.3
2,184,101 - +0.6
2,184,244 + +0.6
2,184,254 - +2.0
2,184,288 - +0.5
2,184,445 + Dsui_2066 0.12 +0.4
2,184,527 + Dsui_2066 0.23 -0.3
2,184,527 + +0.2
2,184,607 + Dsui_2066 0.33 -0.4
2,184,693 - Dsui_2066 0.43 -0.9
2,184,737 + Dsui_2066 0.49 -0.5
2,184,766 - Dsui_2066 0.52 +0.1
2,184,792 - Dsui_2066 0.56 -0.2
2,184,926 - Dsui_2066 0.72 -1.2
2,184,933 - Dsui_2066 0.73 +0.0
2,185,019 + Dsui_2066 0.84 +0.6
2,185,026 - Dsui_2066 0.85 +0.1

Or see this region's nucleotide sequence