Strain Fitness in Dechlorosoma suillum PS around Dsui_1676

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_1674 and Dsui_1675 are separated by 4 nucleotidesDsui_1675 and Dsui_1676 are separated by 79 nucleotidesDsui_1676 and Dsui_1677 are separated by 50 nucleotidesDsui_1677 and Dsui_1678 are separated by 24 nucleotidesDsui_1678 and Dsui_1679 are separated by 1 nucleotides Dsui_1674: Dsui_1674 - EAL domain-containing protein, at 1,761,002 to 1,761,721 _1674 Dsui_1675: Dsui_1675 - hypothetical protein, at 1,761,726 to 1,762,052 _1675 Dsui_1676: Dsui_1676 - biopolymer transport protein, at 1,762,132 to 1,762,623 _1676 Dsui_1677: Dsui_1677 - ribosomal protein S4, bacterial/organelle type, at 1,762,674 to 1,763,291 _1677 Dsui_1678: Dsui_1678 - hypothetical protein, at 1,763,316 to 1,763,588 _1678 Dsui_1679: Dsui_1679 - Mg chelatase, cobalamin biosynthesis protein CobN, at 1,763,590 to 1,767,693 _1679 Position (kb) 1762 1763Strain fitness (log2 ratio) -1 0 1 2 3at 1761.147 kb on + strand, within Dsui_1674at 1761.163 kb on - strandat 1761.195 kb on + strandat 1761.204 kb on - strand, within Dsui_1674at 1761.400 kb on + strandat 1761.478 kb on - strand, within Dsui_1674at 1761.525 kb on + strand, within Dsui_1674at 1761.608 kb on - strand, within Dsui_1674at 1761.716 kb on - strandat 1761.747 kb on + strandat 1761.774 kb on - strandat 1761.807 kb on - strandat 1761.874 kb on - strand, within Dsui_1675at 1761.885 kb on - strand, within Dsui_1675at 1761.924 kb on - strand, within Dsui_1675at 1761.932 kb on + strand, within Dsui_1675at 1762.048 kb on - strandat 1762.089 kb on + strandat 1762.110 kb on + strandat 1762.129 kb on + strandat 1762.164 kb on - strandat 1762.257 kb on - strand, within Dsui_1676at 1762.268 kb on + strandat 1762.401 kb on + strandat 1762.409 kb on - strand, within Dsui_1676at 1762.416 kb on + strand, within Dsui_1676at 1762.417 kb on - strand, within Dsui_1676at 1762.424 kb on - strand, within Dsui_1676at 1762.524 kb on + strand, within Dsui_1676at 1762.524 kb on + strandat 1762.532 kb on - strand, within Dsui_1676at 1762.557 kb on + strandat 1762.560 kb on - strand, within Dsui_1676at 1762.565 kb on - strand, within Dsui_1676at 1762.589 kb on + strandat 1762.705 kb on - strandat 1762.721 kb on - strandat 1762.836 kb on + strand, within Dsui_1677at 1763.031 kb on + strand, within Dsui_1677at 1763.294 kb on - strandat 1763.307 kb on + strandat 1763.327 kb on - strandat 1763.422 kb on + strandat 1763.540 kb on - strand, within Dsui_1678at 1763.596 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction rich media
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1,761,147 + Dsui_1674 0.20 -0.4
1,761,163 - +1.4
1,761,195 + -0.9
1,761,204 - Dsui_1674 0.28 +1.5
1,761,400 + +1.0
1,761,478 - Dsui_1674 0.66 -0.1
1,761,525 + Dsui_1674 0.73 -0.4
1,761,608 - Dsui_1674 0.84 +0.3
1,761,716 - -0.9
1,761,747 + +3.0
1,761,774 - +0.4
1,761,807 - +0.6
1,761,874 - Dsui_1675 0.45 -0.3
1,761,885 - Dsui_1675 0.49 +0.5
1,761,924 - Dsui_1675 0.61 +1.3
1,761,932 + Dsui_1675 0.63 +0.2
1,762,048 - -0.7
1,762,089 + +0.4
1,762,110 + -0.9
1,762,129 + +1.0
1,762,164 - -1.5
1,762,257 - Dsui_1676 0.25 +0.0
1,762,268 + +2.5
1,762,401 + -0.9
1,762,409 - Dsui_1676 0.56 -0.0
1,762,416 + Dsui_1676 0.58 -0.9
1,762,417 - Dsui_1676 0.58 -0.4
1,762,424 - Dsui_1676 0.59 +1.2
1,762,524 + Dsui_1676 0.80 +1.0
1,762,524 + +3.0
1,762,532 - Dsui_1676 0.81 -0.7
1,762,557 + +2.0
1,762,560 - Dsui_1676 0.87 +0.8
1,762,565 - Dsui_1676 0.88 -0.5
1,762,589 + +1.4
1,762,705 - +0.5
1,762,721 - -0.3
1,762,836 + Dsui_1677 0.26 -1.1
1,763,031 + Dsui_1677 0.58 -0.0
1,763,294 - +0.1
1,763,307 + +0.7
1,763,327 - +1.0
1,763,422 + -0.0
1,763,540 - Dsui_1678 0.82 +0.4
1,763,596 - +1.0

Or see this region's nucleotide sequence