Strain Fitness in Dechlorosoma suillum PS around Dsui_0886

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_0884 and Dsui_0885 are separated by 28 nucleotidesDsui_0885 and Dsui_0886 are separated by 5 nucleotidesDsui_0886 and Dsui_0887 are separated by 64 nucleotidesDsui_0887 and Dsui_0888 are separated by 127 nucleotides Dsui_0884: Dsui_0884 - glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit, at 897,598 to 899,055 _0884 Dsui_0885: Dsui_0885 - hypothetical protein, at 899,084 to 899,620 _0885 Dsui_0886: Dsui_0886 - glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit, at 899,626 to 901,095 _0886 Dsui_0887: Dsui_0887 - glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit, at 901,160 to 901,447 _0887 Dsui_0888: Dsui_0888 - cell shape determining protein, MreB/Mrl family, at 901,575 to 902,618 _0888 Position (kb) 899 900 901 902Strain fitness (log2 ratio) -1 0 1at 899.123 kb on - strandat 899.124 kb on - strandat 899.147 kb on - strand, within Dsui_0885at 899.289 kb on - strand, within Dsui_0885at 899.598 kb on - strandat 901.529 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction rich media
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899,123 - +0.4
899,124 - -0.5
899,147 - Dsui_0885 0.12 +0.9
899,289 - Dsui_0885 0.38 -0.0
899,598 - +0.3
901,529 - -0.4

Or see this region's nucleotide sequence