Experiment: rich media
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0396 and Dsui_0397 overlap by 4 nucleotides Dsui_0397 and Dsui_0398 overlap by 4 nucleotides Dsui_0398 and Dsui_0399 are separated by 2 nucleotides Dsui_0399 and Dsui_0400 are separated by 1 nucleotides
Dsui_0396: Dsui_0396 - putative hemolysin, at 394,296 to 395,054
_0396
Dsui_0397: Dsui_0397 - 1-acyl-sn-glycerol-3-phosphate acyltransferase, at 395,051 to 395,878
_0397
Dsui_0398: Dsui_0398 - UDP-glucose-4-epimerase, at 395,875 to 396,888
_0398
Dsui_0399: Dsui_0399 - symmetrical bis(5'-nucleosyl)-tetraphosphatase, at 396,891 to 397,721
_0399
Dsui_0400: Dsui_0400 - putative nucleoside-diphosphate sugar epimerase, at 397,723 to 399,585
_0400
Position (kb) 395
396
397 Strain fitness (log2 ratio) -1
0
1 at 394.897 kb on - strand, within Dsui_0396 at 395.016 kb on + strand at 395.092 kb on - strand at 395.109 kb on - strand at 395.133 kb on + strand at 395.158 kb on - strand, within Dsui_0397 at 395.184 kb on - strand at 395.184 kb on - strand at 395.206 kb on - strand, within Dsui_0397 at 395.280 kb on - strand, within Dsui_0397 at 395.427 kb on + strand, within Dsui_0397 at 395.560 kb on + strand, within Dsui_0397 at 395.729 kb on - strand, within Dsui_0397 at 395.747 kb on - strand, within Dsui_0397 at 395.873 kb on + strand at 395.878 kb on + strand at 396.068 kb on + strand, within Dsui_0398 at 396.094 kb on + strand, within Dsui_0398 at 396.147 kb on - strand, within Dsui_0398 at 396.213 kb on + strand at 396.232 kb on - strand, within Dsui_0398 at 396.276 kb on + strand, within Dsui_0398 at 396.489 kb on - strand, within Dsui_0398 at 396.510 kb on - strand, within Dsui_0398 at 396.535 kb on + strand, within Dsui_0398 at 396.560 kb on + strand, within Dsui_0398 at 396.578 kb on - strand, within Dsui_0398 at 396.612 kb on - strand, within Dsui_0398 at 396.633 kb on - strand, within Dsui_0398 at 396.740 kb on + strand, within Dsui_0398 at 396.740 kb on + strand, within Dsui_0398 at 396.748 kb on - strand, within Dsui_0398 at 396.804 kb on - strand at 396.864 kb on + strand at 396.872 kb on - strand at 397.007 kb on - strand, within Dsui_0399 at 397.141 kb on + strand, within Dsui_0399 at 397.266 kb on - strand, within Dsui_0399 at 397.406 kb on - strand at 397.504 kb on + strand, within Dsui_0399 at 397.538 kb on - strand, within Dsui_0399 at 397.600 kb on + strand at 397.659 kb on + strand at 397.756 kb on - strand at 397.819 kb on + strand at 397.841 kb on + strand at 397.841 kb on + strand at 397.841 kb on + strand at 397.841 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction rich media remove 394,897 - Dsui_0396 0.79 +1.6 395,016 + -1.2 395,092 - +1.1 395,109 - +0.4 395,133 + -0.0 395,158 - Dsui_0397 0.13 -0.3 395,184 - +1.0 395,184 - -0.6 395,206 - Dsui_0397 0.19 -1.0 395,280 - Dsui_0397 0.28 +0.3 395,427 + Dsui_0397 0.45 -0.0 395,560 + Dsui_0397 0.61 +0.2 395,729 - Dsui_0397 0.82 +0.3 395,747 - Dsui_0397 0.84 +0.4 395,873 + -0.0 395,878 + -0.4 396,068 + Dsui_0398 0.19 -0.9 396,094 + Dsui_0398 0.22 -1.0 396,147 - Dsui_0398 0.27 -1.2 396,213 + -0.0 396,232 - Dsui_0398 0.35 -0.2 396,276 + Dsui_0398 0.40 +0.3 396,489 - Dsui_0398 0.61 -0.5 396,510 - Dsui_0398 0.63 -0.5 396,535 + Dsui_0398 0.65 -1.2 396,560 + Dsui_0398 0.68 -0.0 396,578 - Dsui_0398 0.69 -1.2 396,612 - Dsui_0398 0.73 -0.5 396,633 - Dsui_0398 0.75 -0.1 396,740 + Dsui_0398 0.85 +0.4 396,740 + Dsui_0398 0.85 -1.5 396,748 - Dsui_0398 0.86 -1.5 396,804 - -1.5 396,864 + +0.6 396,872 - -1.2 397,007 - Dsui_0399 0.14 -0.8 397,141 + Dsui_0399 0.30 -1.5 397,266 - Dsui_0399 0.45 +0.2 397,406 - -0.0 397,504 + Dsui_0399 0.74 -0.1 397,538 - Dsui_0399 0.78 -0.5 397,600 + +1.6 397,659 + -0.1 397,756 - +0.0 397,819 + -0.9 397,841 + +0.1 397,841 + -0.4 397,841 + +0.2 397,841 + +0.2
Or see this region's nucleotide sequence