Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_3044
Experiment: MoYLS4 with Carbenicillin 0.0468 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Carbenicillin 0.0468 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,840,436 | - | DvMF_3043 | 0.45 | -0.2 | |
3,840,673 | + | DvMF_3043 | 0.69 | +0.1 | |
3,840,698 | - | DvMF_3043 | 0.72 | -0.1 | |
3,841,121 | - | -1.1 | |||
3,841,217 | - | -2.0 | |||
3,841,217 | - | -1.5 | |||
3,841,462 | + | DvMF_3044 | 0.16 | -2.7 | |
3,841,527 | - | DvMF_3044 | 0.22 | -2.1 | |
3,841,626 | + | DvMF_3044 | 0.30 | -3.1 | |
3,841,722 | + | DvMF_3044 | 0.37 | -2.1 | |
3,842,357 | + | DvMF_3044 | 0.89 | -1.8 | |
3,842,376 | + | -2.7 | |||
3,842,436 | + | -3.3 | |||
3,842,757 | + | DvMF_3045 | 0.11 | -1.0 | |
3,842,791 | + | DvMF_3045 | 0.19 | -2.1 | |
3,842,908 | - | DvMF_3045 | 0.45 | -0.7 | |
3,843,026 | - | DvMF_3045 | 0.71 | -0.5 | |
3,843,186 | - | -0.5 | |||
3,843,186 | - | +0.0 | |||
3,843,298 | - | -0.3 | |||
3,843,365 | + | -0.8 | |||
3,843,380 | + | -0.3 | |||
3,843,380 | + | -0.6 | |||
3,843,395 | + | -0.2 | |||
3,843,398 | - | -0.8 | |||
3,843,423 | - | +0.1 |
Or see this region's nucleotide sequence