Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_3042
Experiment: MoYLS4 with Carbenicillin 0.0468 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Carbenicillin 0.0468 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,837,943 | - | +1.9 | |||
3,838,586 | + | DvMF_3041 | 0.53 | -0.1 | |
3,838,594 | - | DvMF_3041 | 0.54 | -0.1 | |
3,839,067 | - | DvMF_3042 | 0.13 | -0.1 | |
3,839,307 | - | DvMF_3042 | 0.38 | -0.8 | |
3,839,601 | + | DvMF_3042 | 0.68 | -0.3 | |
3,839,609 | - | DvMF_3042 | 0.69 | -0.3 | |
3,839,691 | - | DvMF_3042 | 0.78 | +0.3 | |
3,839,765 | - | DvMF_3042 | 0.85 | -0.3 | |
3,840,090 | + | +0.5 | |||
3,840,129 | + | DvMF_3043 | 0.13 | -0.3 | |
3,840,129 | + | DvMF_3043 | 0.13 | +1.6 | |
3,840,137 | - | DvMF_3043 | 0.14 | -0.2 | |
3,840,147 | - | DvMF_3043 | 0.15 | -0.2 | |
3,840,172 | - | DvMF_3043 | 0.17 | -0.5 | |
3,840,436 | - | DvMF_3043 | 0.45 | -0.2 | |
3,840,673 | + | DvMF_3043 | 0.69 | +0.1 | |
3,840,698 | - | DvMF_3043 | 0.72 | -0.1 |
Or see this region's nucleotide sequence