Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2078
Experiment: MoYLS4 with Carbenicillin 0.0468 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Carbenicillin 0.0468 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,581,716 | + | DvMF_2077 | 0.64 | +0.2 | |
2,581,777 | + | DvMF_2077 | 0.68 | -0.5 | |
2,581,809 | + | DvMF_2077 | 0.69 | -0.5 | |
2,581,861 | + | DvMF_2077 | 0.72 | +0.1 | |
2,581,905 | - | DvMF_2077 | 0.75 | -0.5 | |
2,582,033 | - | DvMF_2077 | 0.82 | -0.1 | |
2,582,383 | + | -0.7 | |||
2,582,457 | - | -0.7 | |||
2,582,669 | - | -0.7 | |||
2,582,741 | - | DvMF_2078 | 0.15 | -0.1 | |
2,583,033 | - | DvMF_2078 | 0.73 | -0.3 | |
2,583,068 | - | DvMF_2078 | 0.80 | -0.1 | |
2,583,134 | - | -0.8 | |||
2,583,136 | + | -0.2 | |||
2,583,326 | + | -0.5 | |||
2,583,417 | + | +0.1 | |||
2,583,636 | + | -0.2 | |||
2,583,736 | - | DvMF_2079 | 0.11 | +0.0 | |
2,583,902 | + | DvMF_2079 | 0.20 | -0.1 | |
2,583,932 | + | DvMF_2079 | 0.22 | -0.0 | |
2,583,963 | - | DvMF_2079 | 0.24 | -1.1 | |
2,584,057 | - | DvMF_2079 | 0.29 | -0.6 |
Or see this region's nucleotide sequence