Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0799
Experiment: MoYLS4 with Carbenicillin 0.0468 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Carbenicillin 0.0468 mg/ml |
---|---|---|---|---|---|
remove | |||||
962,417 | - | -0.1 | |||
962,504 | + | -0.6 | |||
962,583 | - | -0.6 | |||
962,859 | + | DvMF_0798 | 0.42 | -0.3 | |
963,068 | + | DvMF_0798 | 0.76 | -0.0 | |
963,186 | - | -0.3 | |||
963,734 | + | thiH | DvMF_0799 | 0.35 | +0.1 |
963,885 | + | thiH | DvMF_0799 | 0.47 | -0.6 |
963,893 | - | thiH | DvMF_0799 | 0.47 | +0.1 |
963,967 | + | thiH | DvMF_0799 | 0.53 | -0.1 |
963,980 | + | thiH | DvMF_0799 | 0.54 | +0.6 |
964,032 | - | thiH | DvMF_0799 | 0.59 | -0.3 |
964,065 | - | thiH | DvMF_0799 | 0.61 | -0.8 |
964,590 | - | -0.0 | |||
964,801 | - | thiG | DvMF_0800 | 0.17 | -0.4 |
964,877 | - | thiG | DvMF_0800 | 0.26 | -0.4 |
965,230 | + | thiG | DvMF_0800 | 0.70 | -0.5 |
965,238 | + | thiG | DvMF_0800 | 0.71 | -0.8 |
965,297 | + | thiG | DvMF_0800 | 0.79 | +0.1 |
965,317 | + | thiG | DvMF_0800 | 0.81 | -0.4 |
965,348 | - | thiG | DvMF_0800 | 0.85 | -0.5 |
965,356 | + | thiG | DvMF_0800 | 0.86 | -0.1 |
965,356 | + | thiG | DvMF_0800 | 0.86 | -0.3 |
965,493 | - | DvMF_0801 | 0.13 | -0.6 | |
965,525 | + | DvMF_0801 | 0.29 | -0.7 | |
965,542 | - | DvMF_0801 | 0.37 | -0.3 |
Or see this region's nucleotide sequence